RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 PCDHA9Q9Y5H5 950 aa12.47□□□□□ -0.41
PPP4R1-206ENST00000577779 PMF1-BGLAPU3KQ54 211 aa12.47□□□□□ -0.41
PPP4R1-206ENST00000577779 GOLGA8QA0A0J9YX86 632 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 C1orf226A1L170 272 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 GOLGA8OA6NCC3 632 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 GOLGA8NF8WBI6 632 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 GOLGA8RI6L899 631 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 ADAMDEC1O15204 470 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 PHGDHO43175 533 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 BCAS2O75934 225 aaPredicted RBP12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 LYZL6O75951 148 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 SEMA3DO95025 777 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 WISP3O95389 354 aaPredicted RBP12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 PABPC4LP0CB38 370 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 ZNF17P17021 662 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 ZNF23P17027 643 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 ELK3P41970 407 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 MGAT5Q09328 741 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 ACAP2Q15057 778 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 PDCD2Q16342 344 aaPredicted RBP12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 ERCC6LQ2NKX8 1250 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 HBMQ6B0K9 141 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 FAM180BQ6P0A1 224 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 CCDC137Q6PK04 289 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 TMEM108Q6UXF1 575 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 ESPNLQ6ZVH7 1005 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 MARCH3Q86UD3 253 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 TDRPQ86YL5 185 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 TUSC5Q8IXB3 177 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 ABHD3Q8WU67 409 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 UBTD2Q8WUN7 234 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 REXO5Q96IC2 774 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 FOXN4Q96NZ1 517 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 SERPINI1Q99574 410 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 RHOJQ9H4E5 214 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 NUDT4Q9NZJ9 180 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 FLRT3Q9NZU0 649 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 KLHL13Q9P2N7 655 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 PSME2Q9UL46 239 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 FKBP7Q9Y680 259 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 ZNF780BQ9Y6R6 833 aa12.46□□□□□ -0.41
PPP4R1-206ENST00000577779 ARFGEF3Q5TH69 2177 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 SUPT3HB4E1H0 165 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 FOXE1O00358 373 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 SMAD9O15198 467 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 NDUFB5O43674 189 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 GUCY1B2O75343 617 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 SUPT3HO75486 399 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 DHRS4L1P0CG22 281 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 CLK3P49761 638 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 MAPK12P53778 367 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 POU4F1Q01851 419 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 SPOCK1Q08629 439 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 RNPS1Q15287 305 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 MIDNQ504T8 468 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 PDSS1Q5T2R2 415 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 STEAP4Q687X5 459 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 ZNF544Q6NX49 715 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 B3GLCTQ6Y288 498 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 SSX8Q7RTT4 187 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 PAGE2Q7Z2X7 111 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 RNF128Q8TEB7 428 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 OSTF1Q92882 214 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 TSPAN17Q96FV3 270 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 TSPY26PQ9H489 355 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 ALG9Q9H6U8 611 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 TMEM185BQ9H7F4 350 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 ZNF696Q9H7X3 374 aa12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 FAM120CQ9NX05 1096 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
PPP4R1-206ENST00000577779 A0A0J9YW62 118 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 ZNF814B7Z6K7 855 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 UBXN8O00124 270 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 ME2P23368 584 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 CARD18P57730 90 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 RAC1P63000 192 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 ZNF628Q5EBL2 1059 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 SH2D4BQ5SQS7 431 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 TIMM23BQ5SRD1 257 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 RINLQ6ZS11 566 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 Q6ZT83 130 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 TBC1D1Q86TI0 1168 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 TMEM139Q8IV31 216 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 STAG3L4Q8TBR4 150 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 WDR20Q8TBZ3 569 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 ZNF675Q8TD23 568 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 FAM216AQ8WUB2 273 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 ERP27Q96DN0 273 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 CNRIP1Q96F85 164 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 TRMOQ9BU70 441 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 MRPL1Q9BYD6 325 aaKnown RBP12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 METTL17Q9H7H0 456 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 PFDN4Q9NQP4 134 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 AHSPQ9NZD4 102 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 ADAM29Q9UKF5 820 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 ZNF281Q9Y2X9 895 aa12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 MTO1Q9Y2Z2 717 aaKnown RBP12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 HEATR1Q9H583 2144 aaKnown RBP12.44□□□□□ -0.42
PPP4R1-206ENST00000577779 LOC390937A0A1W2PQ73 354 aa12.43□□□□□ -0.42
PPP4R1-206ENST00000577779 TMPRSS2O15393 492 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms