RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 PRSS42Q7Z5A4 293 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 LINC00518Q8N0U6 118 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 SUN3Q8TAQ9 357 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 UBASH3BQ8TF42 649 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 RERGQ96A58 199 aaPredicted RBP12.91□□□□□ -0.34
RNF43-202ENST00000577625 PPA2Q9H2U2 334 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 SEMA6CQ9H3T2 930 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 UCK1Q9HA47 277 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 ENTPD4Q9Y227 616 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 HSPB11Q9Y547 144 aa12.91□□□□□ -0.34
RNF43-202ENST00000577625 TECTAO75443 2155 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 ARPC4-TTLL3A0A0A6YYG9 625 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 LOC100506127A0A0U1RQW1 187 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 A0A1W2PS29 197 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 HCRTR1O43613 425 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 SDC3O75056 442 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 SLC22A5O76082 557 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 NR2F6P10588 404 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 TNNI3P19429 210 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 FPR1P21462 350 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 DNAJA1P31689 397 aaKnown RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 TNFSF8P32971 234 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 CAPZBP47756 277 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 ARHGDIAP52565 204 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 LIMK1P53667 647 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 SNRPD2P62316 118 aaKnown RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 SCN1BQ07699 218 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 MAD2L1BPQ15013 274 aaPredicted RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 DEFB133Q30KQ1 61 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 ZNF750Q32MQ0 723 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 IFI44LQ53G44 452 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 LAMTOR1Q6IAA8 161 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 TNFAIP8L2Q6P589 184 aaPredicted RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 TSSK4Q6SA08 328 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 ZNF782Q6ZMW2 699 aaPredicted RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 AHSA2Q719I0 299 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 ASB15Q8WXK1 588 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 DACT3Q96B18 629 aaPredicted RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 Q96MT0 163 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 SERINC2Q96SA4 455 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 RNF121Q9H920 327 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 FAM60AQ9NP50 221 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 SEMA3GQ9NS98 782 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 KCMF1Q9P0J7 381 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 SLC23A1Q9UHI7 598 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 PHF11Q9UIL8 331 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 GMPPBQ9Y5P6 360 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 B4DXG7 233 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 HMGN4O00479 90 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 BCAT2O15382 392 aaPredicted RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 DIRAS1O95057 198 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 PDGFBP01127 241 aaPredicted RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 CSNK2A2P19784 350 aaPredicted RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 PTGER1P34995 402 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 KRT20P35900 424 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 AFF3P51826 1226 aaKnown RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 TNFRSF17Q02223 184 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 TP53BP2Q13625 1128 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 RIN1Q13671 783 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 RUNX2Q13950 521 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 SIM2Q14190 667 aaPredicted RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 ZNF267Q14586 743 aaPredicted RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 SMN1Q16637 294 aaKnown RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 MANEAQ5SRI9 462 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 CEP68Q76N32 757 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 ABHD13Q7L211 337 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 SFXN5Q8TD22 340 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 SLC38A5Q8WUX1 472 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 SLC35G5Q96KT7 338 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 C10orf90Q96M02 699 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 SERHL2Q9H4I8 314 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 RIBC2Q9H4K1 309 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 REEP1Q9H902 201 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 ZCCHC3Q9NUD5 404 aaKnown RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 THUMPD1Q9NXG2 353 aaKnown RBP12.9□□□□□ -0.34
RNF43-202ENST00000577625 ING3Q9NXR8 418 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 AASSQ9UDR5 926 aa12.9□□□□□ -0.34
RNF43-202ENST00000577625 UNC13CQ8NB66 2214 aa12.9□□□□□ -0.35
RNF43-202ENST00000577625 PIAS2O75928 621 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 C8orf89P0DMQ9 161 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 ZNF10P21506 573 aaPredicted RBP12.89□□□□□ -0.35
RNF43-202ENST00000577625 BUD31P41223 144 aaPredicted RBP12.89□□□□□ -0.35
RNF43-202ENST00000577625 TEKQ02763 1124 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 COL9A2Q14055 689 aaPredicted RBP12.89□□□□□ -0.35
RNF43-202ENST00000577625 PROX2Q3B8N5 592 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 OGFOD3Q6PK18 319 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 PRSS41Q7RTY9 318 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 TSEN54Q7Z6J9 526 aaKnown RBP12.89□□□□□ -0.35
RNF43-202ENST00000577625 TSPYL5Q86VY4 417 aaPredicted RBP12.89□□□□□ -0.35
RNF43-202ENST00000577625 ZNF655Q8N720 491 aaPredicted RBP12.89□□□□□ -0.35
RNF43-202ENST00000577625 C19orf47Q8N9M1 422 aaKnown RBP12.89□□□□□ -0.35
RNF43-202ENST00000577625 OR8H1Q8NGG4 311 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 SPPL2AQ8TCT8 520 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 MOAP1Q96BY2 351 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 ZNF681Q96N22 645 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 TMEM74BQ9NUR3 256 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 SAMHD1Q9Y3Z3 626 aaKnown RBP12.89□□□□□ -0.35
RNF43-202ENST00000577625 ZNF451Q9Y4E5 1061 aa12.89□□□□□ -0.35
RNF43-202ENST00000577625 RP1P56715 2156 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms