RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 HGDQ93099 445 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 TM4SF18Q96CE8 201 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 NTNG2Q96CW9 530 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 OMA1Q96E52 524 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 WDYHV1Q96HA8 205 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 NTMT1Q9BV86 223 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 UBQLN3Q9H347 655 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 CDC42EP4Q9H3Q1 356 aaKnown RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 ELOVL6Q9H5J4 265 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 CXorf56Q9H5V9 222 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 GALNT9Q9HCQ5 603 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 SERHLQ9NQF3 203 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 RASSF1Q9NS23 344 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 QPCTLQ9NXS2 382 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 PSD3Q9NYI0 1048 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 MAT2BQ9NZL9 334 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 HEY2Q9UBP5 337 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 B4GALT7Q9UBV7 327 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ST6GALNAC2Q9UJ37 374 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ZNF225Q9UK10 706 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 SLC12A4Q9UP95 1085 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 PLLPQ9Y342 182 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 ANKRD17O75179 2603 aaKnown RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 INTS1Q8N201 2190 aaKnown RBP5.66□□□□□ -1.5
NUP88-212ENST00000576708 DNAJC13O75165 2243 aa5.66□□□□□ -1.5
NUP88-212ENST00000576708 A8MT66 165 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 CAPN14A8MX76 684 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 AHRRA9YTQ3 701 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 TRIM49D1C9J1S8 452 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 STX16-NPEPL1H3BU86 382 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 STX16O14662 325 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 ICOSLGO75144 302 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 SMIM24O75264 130 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 UGT2B11O75310 529 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 URI1O94763 535 aaPredicted RBP5.65□□□□□ -1.5
NUP88-212ENST00000576708 OR4F21O95013 312 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 SEMA3DO95025 777 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 SNX4O95219 450 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 INHBAP08476 426 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 RPS17P08708 135 aaKnown RBP5.65□□□□□ -1.5
NUP88-212ENST00000576708 RBP1P09455 135 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 CTAGE8P0CG41 777 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 CD99P14209 185 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 CD1EP15812 388 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 PHBP35232 272 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 ALDH9A1P49189 494 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 STARP49675 285 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 HTR6P50406 440 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 ASCL1P50553 236 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 NRG3P56975 720 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 SESN3P58005 492 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 SRYQ05066 204 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 PLCXD2Q0VAA5 305 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 UNC50Q53HI1 259 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 C10orf62Q5T681 223 aaPredicted RBP5.65□□□□□ -1.5
NUP88-212ENST00000576708 TIGD3Q6B0B8 471 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 OR5M10Q6IEU7 315 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 SLC48A1Q6P1K1 146 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 SCIMPQ6UWF3 145 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 FRMD7Q6ZUT3 714 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 CCDC91Q7Z6B0 441 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 CXorf67Q86X51 503 aaPredicted RBP5.65□□□□□ -1.5
NUP88-212ENST00000576708 LACC1Q8IV20 430 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 WDR75Q8IWA0 830 aaKnown RBP5.65□□□□□ -1.5
NUP88-212ENST00000576708 CTAGE4Q8IX94 777 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 C1orf52Q8N6N3 182 aaKnown RBP5.65□□□□□ -1.5
NUP88-212ENST00000576708 FAM83FQ8NEG4 500 aaPredicted RBP5.65□□□□□ -1.5
NUP88-212ENST00000576708 MYRIPQ8NFW9 859 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 OR7G1Q8NGA0 311 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 OR52R1Q8NGF1 315 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 TRPC4APQ8TEL6 797 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 DCAKDQ8WVC6 231 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 SELENOMQ8WWX9 145 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 IFT81Q8WYA0 676 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 KAT2AQ92830 837 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 RNASE6Q93091 150 aaKnown RBP5.65□□□□□ -1.5
NUP88-212ENST00000576708 ABTB1Q969K4 478 aaPredicted RBP5.65□□□□□ -1.5
NUP88-212ENST00000576708 KLHL29Q96CT2 875 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 CNRIP1Q96F85 164 aaPredicted RBP5.65□□□□□ -1.5
NUP88-212ENST00000576708 TMEM41AQ96HV5 264 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 LCORQ96JN0 433 aaPredicted RBP5.65□□□□□ -1.5
NUP88-212ENST00000576708 ZNF681Q96N22 645 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 PAFAH2Q99487 392 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 TUBA1CQ9BQE3 449 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 METTL7AQ9H8H3 244 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 AHSPQ9NZD4 102 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 ZNF639Q9UID6 485 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 ADAM29Q9UKF5 820 aa5.65□□□□□ -1.5
NUP88-212ENST00000576708 NINQ8N4C6 2090 aa5.65□□□□□ -1.51
NUP88-212ENST00000576708 MED13LQ71F56 2210 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 ARHGAP21Q5T5U3 1957 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 A0A1W2PPR1 153 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 C1orf226A1L170 272 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 MBD3L4A6NDZ8 208 aaPredicted RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 MBD3L3A6NE82 208 aaPredicted RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 MBD3L5A6NJ08 208 aaPredicted RBP5.64□□□□□ -1.51
NUP88-212ENST00000576708 A6NNC1 897 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 B4DXG7 233 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 EEF1E1-BLOC1S5C9J1V9 151 aa5.64□□□□□ -1.51
NUP88-212ENST00000576708 MANBAO00462 879 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms