RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PRAMEF9Q5VWM5 478 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 SHQ1Q6PI26 577 aaKnown RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 KLHL17Q6TDP4 642 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 TREML4Q6UXN2 200 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 DEF8Q6ZN54 512 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 GALNT10Q86SR1 603 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 TBC1D1Q86TI0 1168 aaPredicted RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 GGNQ86UU5 652 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 OR2M3Q8NG83 312 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 HUS1BQ8NHY5 278 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 GRK7Q8WTQ7 553 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 RNF138Q8WVD3 245 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 C1GALT1C1Q96EU7 318 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 MTERF1Q99551 399 aaKnown RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 NAT9Q9BTE0 207 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 IQCGQ9H095 443 aaKnown RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 METTL17Q9H7H0 456 aaPredicted RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 DDX31Q9H8H2 851 aaKnown RBP5.22□□□□□ -1.57
SMG6-219ENST00000575663 MAT2BQ9NZL9 334 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 CD274Q9NZQ7 290 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 MED11Q9P086 117 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 RAB21Q9UL25 225 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 ABCG2Q9UNQ0 655 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 CMYA5Q8N3K9 4069 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 MGAM2Q2M2H8 2515 aa5.22□□□□□ -1.57
SMG6-219ENST00000575663 GOLGA8QA0A0J9YX86 632 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 FAM95CA0A1B0GW59 222 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 C1orf226A1L170 272 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 GOLGA8OA6NCC3 632 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 E7EQL1 145 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 GOLGA8NF8WBI6 632 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 GOLGA8RI6L899 631 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 PGRMC2O15173 223 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 TAPBPO15533 448 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 NDUFB5O43674 189 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 CXCL13O43927 109 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 TSPAN2O60636 221 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 GUCY1B2O75343 617 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 ERAL1O75616 437 aaKnown RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 LYZL6O75951 148 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 LY6HO94772 140 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 SNUPNO95149 360 aaKnown RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 CBX7O95931 251 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 KRT14P02533 472 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 FGGP02679 453 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 COL6A2P12110 1019 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 GGT1P19440 569 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 S1PR1P21453 382 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 PTAFRP25105 342 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 PTX3P26022 381 aaPredicted RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 APEX1P27695 318 aaKnown RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 BSGP35613 385 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 EMDP50402 254 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 CHN2P52757 468 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 GAS1P54826 345 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 GPX6P59796 221 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 HILS1P60008 231 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 SNRPD2P62316 118 aaKnown RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 TMED1Q13445 227 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 CUL3Q13618 768 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.21□□□□□ -1.58
SMG6-219ENST00000575663 C11orf91Q3C1V1 193 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 TEDDM1Q5T9Z0 273 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 LGSNQ5TDP6 509 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 HBMQ6B0K9 141 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 MFSD12Q6NUT3 480 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 SLC48A1Q6P1K1 146 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 FAM111BQ6SJ93 734 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 Q6ZSR9 355 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 Q6ZT83 130 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 ESPNLQ6ZVH7 1005 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 USP43Q70EL4 1123 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 ZNF771Q7L3S4 317 aaPredicted RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 PAGE2Q7Z2X7 111 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 P2RY8Q86VZ1 359 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 IFT20Q8IY31 132 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 TEX29Q8N6K0 151 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 LINC01356Q8N9X3 169 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 PDPRQ8NCN5 879 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 OR2W6PQ8NHA6 318 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 OR2V1Q8NHB1 315 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 UHMK1Q8TAS1 419 aaKnown RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 RNF128Q8TEB7 428 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 HPS1Q92902 700 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 EXT2Q93063 718 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 CPNE4Q96A23 557 aaPredicted RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 MRPL24Q96A35 216 aaKnown RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 ESAMQ96AP7 390 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 EFHD2Q96C19 240 aaPredicted RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 MTBPQ96DY7 904 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 ADGRG7Q96K78 797 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 SIGLEC10Q96LC7 697 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 HBEGFQ99075 208 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 INPP5KQ9BT40 448 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 ZNF747Q9BV97 191 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 ZNF717Q9BY31 904 aaPredicted RBP5.21□□□□□ -1.58
SMG6-219ENST00000575663 BPESC1Q9GZL8 116 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 DERL2Q9GZP9 239 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 RAB17Q9H0T7 212 aa5.21□□□□□ -1.58
SMG6-219ENST00000575663 POPDC3Q9HBV1 291 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms