RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PRR7Q8TB68 274 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 RNF138Q8WVD3 245 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 OIT3Q8WWZ8 545 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 GNRHR2Q96P88 292 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 SDF2Q99470 211 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 PAIP1Q9H074 479 aaKnown RBP11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 ACKR4Q9NPB9 350 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 SAR1AQ9NR31 198 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 KCNE3Q9Y6H6 103 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 CAPN7Q9Y6W3 813 aa11.66□□□□□ -0.54
TRAPPC1-206ENST00000573989 POLEQ07864 2286 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 TRGV5A0A0B4J1U4 118 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 C2orf72A6NCS6 295 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 OR14I1A6ND48 311 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 BBIP1A8MTZ0 92 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 EVPLLA8MZ36 301 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 CLIC1O00299 241 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 HMGN4O00479 90 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 PDE9AO76083 593 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 ANGPTL1O95841 491 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 IGHG3P01860 377 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 HPNP05981 417 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 RFPL3SP0C7P2 107 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 NR2F1P10589 423 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 MSX1P28360 303 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 PTPN6P29350 595 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 PTGS2P35354 604 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 DCTP40126 519 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 ATP12AP54707 1039 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 GAS1P54826 345 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 CASP9P55211 416 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 UBAP2LQ14157 1087 aaKnown RBP11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 GANABQ14697 944 aaKnown RBP11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 GPAT3Q53EU6 434 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 PAGE3Q5JUK9 113 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 FNDC7Q5VTL7 733 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 MTERF4Q7Z6M4 381 aaKnown RBP11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 MARCH3Q86UD3 253 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 SPPL2CQ8IUH8 684 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 DPP10Q8N608 796 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 WDSUB1Q8N9V3 476 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 OR4C3Q8NH37 302 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 PNPT1Q8TCS8 783 aaKnown RBP11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 PMM1Q92871 262 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 RAB8BQ92930 207 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 SARAFQ96BY9 339 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 ROPN1LQ96C74 230 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 NTNG2Q96CW9 530 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 TRNT1Q96Q11 434 aaKnown RBP11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 NMUR2Q9GZQ4 415 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 ZNF350Q9GZX5 532 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 UBQLN3Q9H347 655 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 SERHL2Q9H4I8 314 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 CACYBPQ9HB71 228 aaKnown RBP11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 SLC52A3Q9NQ40 469 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 PLSCR2Q9NRY7 297 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 CALML5Q9NZT1 146 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 P2RX2Q9UBL9 471 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 DKKL1Q9UK85 242 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 WDR45Q9Y484 360 aa11.65□□□□□ -0.54
TRAPPC1-206ENST00000573989 A0A1B0GTH9 108 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 A0A1B0GUH1 482 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 PYCARD-AS1I3L0S3 204 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 PRRG2O14669 202 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 SNX3O60493 162 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLC19A2O60779 497 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 DRD4P21917 467 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 SRD5A2P31213 254 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 UQCRFS1P47985 274 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 DSCR4P56555 118 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 DSTNP60981 165 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 KLF10Q13118 480 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 STX5Q13190 355 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 NFYCQ13952 458 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 CYLC2Q14093 348 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 RGNQ15493 299 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 GPR68Q15743 365 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZNF630Q2M218 657 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 EIF2S3LQ2VIR3 472 aaKnown RBP11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 COQ5Q5HYK3 327 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 TRILQ7L0X0 811 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 DHDDSQ86SQ9 333 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZNF614Q8N883 585 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 PCYOX1LQ8NBM8 494 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 PHOSPHO1Q8TCT1 267 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 DUSP19Q8WTR2 217 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 AURKBQ96GD4 344 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLC6A13Q9NSD5 602 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 FBXO34Q9NWN3 711 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 FLRT3Q9NZU0 649 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 OSGIN2Q9Y236 505 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 MRPS18CQ9Y3D5 142 aaKnown RBP11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 DTNAQ9Y4J8 743 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 MYO18BQ8IUG5 2567 aa11.64□□□□□ -0.55
TRAPPC1-206ENST00000573989 FASNP49327 2511 aaKnown RBP11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 A0A1B0GVC2 190 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 FAM47E-STBD1D6RA91 191 aa11.63□□□□□ -0.55
TRAPPC1-206ENST00000573989 GTPBP1O00178 669 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms