RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 UBQLN4Q9NRR5 601 aa10.08□□□□□ -0.8
CHD3-216ENST00000573936 THUMPD1Q9NXG2 353 aaKnown RBP10.08□□□□□ -0.8
CHD3-216ENST00000573936 LEF1Q9UJU2 399 aaPredicted RBP10.08□□□□□ -0.8
CHD3-216ENST00000573936 WIF1Q9Y5W5 379 aa10.08□□□□□ -0.8
CHD3-216ENST00000573936 CNTRLQ7Z7A1 2325 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 LRRC3CA6NJW4 275 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 SCDO00767 359 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 NDUFAB1O14561 156 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 GNB5O14775 395 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 SLC22A2O15244 555 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 SUSD5O60279 629 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 CDC40O60508 579 aaKnown RBP eCLIP10.07□□□□□ -0.8
CHD3-216ENST00000573936 STX11O75558 287 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 OXSR1O95747 527 aaPredicted RBP10.07□□□□□ -0.8
CHD3-216ENST00000573936 IGHG3P01860 377 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 GSNP06396 782 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 GUSBP08236 651 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 SNRPB2P08579 225 aaKnown RBP10.07□□□□□ -0.8
CHD3-216ENST00000573936 OR12D1P0DN82 309 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 ENDOUP21128 410 aaKnown RBP10.07□□□□□ -0.8
CHD3-216ENST00000573936 TBXA2RP21731 343 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 PPIBP23284 216 aaKnown RBP10.07□□□□□ -0.8
CHD3-216ENST00000573936 GDF1P27539 372 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 MAGEA5P43359 124 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 GAS1P54826 345 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 CASP6P55212 293 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 RPS26P62854 115 aaKnown RBP10.07□□□□□ -0.8
CHD3-216ENST00000573936 C17orf67Q0P5P2 114 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 GRAMD1BQ3KR37 738 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 CMPK2Q5EBM0 449 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 LRIF1Q5T3J3 769 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 CCNJQ5T5M9 372 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 GKAP1Q5VSY0 366 aaPredicted RBP10.07□□□□□ -0.8
CHD3-216ENST00000573936 ARHGAP11AQ6P4F7 1023 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 TNFAIP8L2Q6P589 184 aaPredicted RBP10.07□□□□□ -0.8
CHD3-216ENST00000573936 SLC2A7Q6PXP3 512 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 C16orf62Q7Z3J2 963 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 RNF130Q86XS8 419 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 PLCZ1Q86YW0 608 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 MISPQ8IVT2 679 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 CLEC4FQ8N1N0 589 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 OR5D16Q8NGK9 328 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 OIT3Q8WWZ8 545 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 OTUB1Q96FW1 271 aaPredicted RBP10.07□□□□□ -0.8
CHD3-216ENST00000573936 SDF2Q99470 211 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 PAIP1Q9H074 479 aaKnown RBP10.07□□□□□ -0.8
CHD3-216ENST00000573936 DEFB127Q9H1M4 99 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 TSPAN10Q9H1Z9 355 aaPredicted RBP10.07□□□□□ -0.8
CHD3-216ENST00000573936 ZNF703Q9H7S9 590 aaPredicted RBP10.07□□□□□ -0.8
CHD3-216ENST00000573936 TPT1P8Q9HAU6 139 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 GALNT9Q9HCQ5 603 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 SLC52A3Q9NQ40 469 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 PLSCR2Q9NRY7 297 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 PPP4R1LQ9P1A2 415 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 LIPT1Q9Y234 373 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 SLC5A6Q9Y289 635 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 C15orf41Q9Y2V0 281 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 ARL2BPQ9Y2Y0 163 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 NDUFAF1Q9Y375 327 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 PCDHB14Q9Y5E9 798 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 KCNE3Q9Y6H6 103 aa10.07□□□□□ -0.8
CHD3-216ENST00000573936 TRGV5A0A0B4J1U4 118 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 A0A1B0GVC2 190 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 A0A1W2PQD3 144 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 C2orf72A6NCS6 295 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 TMEM247A6NEH6 219 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 ALG1L2C9J202 215 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 H3BNH8 94 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 CLIC1O00299 241 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 ANGPT2O15123 496 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 NDUFB5O43674 189 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 SCO2O43819 266 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 TRAPPC6AO75865 159 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 HPNP05981 417 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 RFPL3SP0C7P2 107 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 CAPN3P20807 821 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 PTPN6P29350 595 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 GCKP35557 465 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 CRATP43155 626 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 ATP12AP54707 1039 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 HPCAP84074 193 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 TOMM20Q15388 145 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 FLYWCH1Q4VC44 716 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 HEPHL1Q6MZM0 1159 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 DNAJC14Q6Y2X3 702 aaPredicted RBP10.06□□□□□ -0.8
CHD3-216ENST00000573936 TRILQ7L0X0 811 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 MARCH3Q86UD3 253 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 OR4K17Q8NGC6 315 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 OR4C3Q8NH37 302 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 PMM1Q92871 262 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 GNRHR2Q96P88 292 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 NMUR2Q9GZQ4 415 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 UBQLN3Q9H347 655 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 SERHL2Q9H4I8 314 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 EXO5Q9H790 373 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 PTGES2Q9H7Z7 377 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 SAR1AQ9NR31 198 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 CORO2BQ9UQ03 480 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 ZNF835Q9Y2P0 537 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 MRPS18CQ9Y3D5 142 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms