RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TFPIP10646 304 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 F3P13726 295 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 CSNK2A2P19784 350 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-206ENST00000573852 PDX1P52945 283 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 GPR176Q14439 515 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 LTB4RQ15722 352 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 TMEM44Q2T9K0 475 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 SLC48A1Q6P1K1 146 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 IL20RBQ6UXL0 311 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 ELP4Q96EB1 424 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 SLC41A3Q96GZ6 507 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 CFHR5Q9BXR6 569 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 HDHD2Q9H0R4 259 aa17.81■□□□□ 0.44
SCARF1-206ENST00000573852 PPIL3Q9H2H8 161 aaKnown RBP17.81■□□□□ 0.44
SCARF1-206ENST00000573852 C6orf106Q9H6K1 298 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-206ENST00000573852 H2AFY2Q9P0M6 372 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-206ENST00000573852 ZFR2Q9UPR6 939 aaKnown RBP17.81■□□□□ 0.44
SCARF1-206ENST00000573852 AHRP35869 848 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 SMARCD3Q6STE5 483 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 MBOAT2Q6ZWT7 520 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 C16orf62Q7Z3J2 963 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 MRPL43Q8N983 215 aaKnown RBP17.8■□□□□ 0.44
SCARF1-206ENST00000573852 SLC37A3Q8NCC5 494 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 MOAP1Q96BY2 351 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 TIMP4Q99727 224 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 TEX12Q9BXU0 123 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 OSGEPL1Q9H4B0 414 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 MED20Q9H944 212 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 SLC28A3Q9HAS3 691 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 HSPB11Q9Y547 144 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 PTPRSQ13332 1948 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 ADH1CP00326 375 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 IFNA8P32881 189 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 VIPR2P41587 438 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 RAB8AP61006 207 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 MAB21L1Q13394 359 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 CXXC5Q7LFL8 322 aaKnown RBP17.8■□□□□ 0.44
SCARF1-206ENST00000573852 TTLQ8NG68 377 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 OR2T33Q8NG76 320 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 SLC35A4Q96G79 324 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 CITED4Q96RK1 184 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 SLC6A20Q9NP91 592 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 TRPV5Q9NQA5 729 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 IMP3Q9NV31 184 aaKnown RBP17.8■□□□□ 0.44
SCARF1-206ENST00000573852 OR1A2Q9Y585 309 aa17.8■□□□□ 0.44
SCARF1-206ENST00000573852 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 RGS9O75916 674 aaPredicted RBP17.79■□□□□ 0.44
SCARF1-206ENST00000573852 EPCAMP16422 314 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 MNX1P50219 401 aaPredicted RBP17.79■□□□□ 0.44
SCARF1-206ENST00000573852 ASB18Q6ZVZ8 466 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 AKAP1Q92667 903 aaKnown RBP eCLIP17.79■□□□□ 0.44
SCARF1-206ENST00000573852 CREB3L1Q96BA8 519 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 GIMAP5Q96F15 307 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 TBX5Q99593 518 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 UBQLN3Q9H347 655 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 SYNDIG1Q9H7V2 258 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 MDC1Q14676 2089 aaKnown RBP17.79■□□□□ 0.44
SCARF1-206ENST00000573852 A0A1B0GVC2 190 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 A6NIN4 97 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 C12orf71A8MTZ7 269 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 PRKAR1BP31321 381 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 MPIP34949 423 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 GCGRP47871 477 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 RAB28P51157 221 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 STXBP1P61764 594 aaKnown RBP17.79■□□□□ 0.44
SCARF1-206ENST00000573852 FAM209AQ5JX71 171 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 PLBD1Q6P4A8 553 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 CACUL1Q86Y37 369 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 DNAJC5GQ8N7S2 189 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 TMEM99Q8N816 258 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 ACOT12Q8WYK0 555 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 NACC2Q96BF6 587 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 ZNF681Q96N22 645 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 UBL7Q96S82 380 aaPredicted RBP17.79■□□□□ 0.44
SCARF1-206ENST00000573852 JAM3Q9BX67 310 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 MBNL1Q9NR56 388 aaKnown RBP17.79■□□□□ 0.44
SCARF1-206ENST00000573852 CYSLTR2Q9NS75 346 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 KLHL28Q9NXS3 571 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 GPSM3Q9Y4H4 160 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 CHD7Q9P2D1 2997 aa17.79■□□□□ 0.44
SCARF1-206ENST00000573852 ZGLP1P0C6A0 271 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 NDUFV2P19404 249 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 SHC1P29353 583 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 SLC6A1P30531 599 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 MTNR1BP49286 362 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 RNF144AP50876 292 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-206ENST00000573852 P2RX3P56373 397 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 CLDN2P57739 230 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 C19orf57Q0VDD7 668 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 SMUG1Q53HV7 270 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 RAB42Q8N4Z0 105 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 OR2L5Q8NG80 312 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 OR5M3Q8NGP4 307 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 ARMC5Q96C12 935 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 TRAF4Q9BUZ4 470 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-206ENST00000573852 RNF208Q9H0X6 261 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 MRPS30Q9NP92 439 aaKnown RBP17.78■□□□□ 0.44
SCARF1-206ENST00000573852 BABAM2Q9NXR7 383 aa17.78■□□□□ 0.44
SCARF1-206ENST00000573852 MUC22E2RYF6 1773 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-206ENST00000573852 EIF4EP06730 217 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms