RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 PFDN4Q9NQP4 134 aa8.35□□□□□ -1.07
NPLOC4-210ENST00000572824 DLL4Q9NR61 685 aa8.35□□□□□ -1.07
NPLOC4-210ENST00000572824 PSD3Q9NYI0 1048 aa8.35□□□□□ -1.07
NPLOC4-210ENST00000572824 JKAMPQ9P055 326 aa8.35□□□□□ -1.07
NPLOC4-210ENST00000572824 NFU1Q9UMS0 254 aa8.35□□□□□ -1.07
NPLOC4-210ENST00000572824 POLR3HQ9Y535 204 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-210ENST00000572824 USF3Q68DE3 2245 aa8.35□□□□□ -1.07
NPLOC4-210ENST00000572824 CSPG4Q6UVK1 2322 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 EXOC1LA0A1B0GW35 172 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 A0A1W2PPM1 405 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 FRG2CA6NGY1 282 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 H0Y3Z8 333 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 DVL2O14641 736 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 ZIC3O60481 467 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 TSPAN2O60636 221 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 REM1O75628 298 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 SUPT7LO94864 414 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 ESRRBO95718 433 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 OTCP00480 354 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 TMIGD3P0DMS9 266 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 CYP4B1P13584 511 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 CD99P14209 185 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 RAC2P15153 192 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 CD1EP15812 388 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 KRT15P19012 456 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 CSNK2A2P19784 350 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 EFNA1P20827 205 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 TIA1P31483 386 aaKnown RBP eCLIP8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 TIMP3P35625 211 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 DEKP35659 375 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 CPOXP36551 454 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 MC3RP41968 323 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 NRG3P56975 720 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 ADAM8P78325 824 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 CKAP4Q07065 602 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 FBXL19-AS1Q494R0 122 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 SH2D4BQ5SQS7 431 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 GPRIN3Q6ZVF9 776 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 PAGE2Q7Z2X7 111 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 ADGRE4PQ86SQ3 457 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 UBQLNLQ8IYU4 475 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 DND1Q8IYX4 353 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 OR7G1Q8NGA0 311 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 OR14L1PQ8NHC6 308 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 FBXO30Q8TB52 745 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 FIG4Q92562 907 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 HSPBAP1Q96EW2 488 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 C11orf24Q96F05 449 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 OTUB1Q96FW1 271 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 ZNF845Q96IR2 970 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 FOXC2Q99958 501 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 PLEKHF2Q9H8W4 249 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 TBK1Q9UHD2 729 aa8.34□□□□□ -1.07
NPLOC4-210ENST00000572824 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 GXYLT2A0PJZ3 443 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 C7orf72A4D263 438 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 GOLGA6L10A6NI86 522 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 CD8B2A6NJW9 211 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 AHRRA9YTQ3 701 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 G3V2L1 256 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 PLOD2O00469 737 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 PSPNO60542 156 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 ERN1O75460 977 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 TNFSF13O75888 250 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 SNX4O95219 450 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 IGKV1D-16P01601 117 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 HRGP04196 525 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 SHBGP04278 402 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 JUNP05412 331 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 ZNF708P17019 499 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 GRK2P25098 689 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 CTSSP25774 331 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 TMED10P49755 219 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 DGKQP52824 942 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 SUCLG1P53597 346 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 SIRPAP78324 504 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 PSG6Q00889 435 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 ZNF155Q12901 538 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 BIKQ13323 160 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 ZNF385BQ569K4 471 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 C6orf163Q5TEZ5 329 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 TMEM107Q6UX40 140 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 APOOLQ6UXV4 268 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 LARP4Q71RC2 724 aaKnown RBP eCLIP8.33□□□□□ -1.085e-6■■□□□ 12.4
NPLOC4-210ENST00000572824 CCDC91Q7Z6B0 441 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 ATG4DQ86TL0 474 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 SLC44A2Q8IWA5 706 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 LILRA2Q8N149 483 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 C17orf47Q8NEP4 570 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 ZNF675Q8TD23 568 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 RNF138Q8WVD3 245 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 EGLN2Q96KS0 407 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 COL21A1Q96P44 957 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 BTBD9Q96Q07 612 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 ZNF382Q96SR6 550 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 SECISBP2Q96T21 854 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 RBM24Q9BX46 236 aaKnown RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 OPN3Q9H1Y3 402 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 BRF2Q9HAW0 419 aa8.33□□□□□ -1.08
NPLOC4-210ENST00000572824 TAS2R10Q9NYW0 307 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms