RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 LAMP1P11279 417 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 CPOXP36551 454 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 HPCAL1P37235 193 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 FRKP42685 505 aaPredicted RBP12.42□□□□□ -0.42
RAB40B-204ENST00000571554 ASMTP46597 345 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 ART1P52961 327 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 PSMD4P55036 377 aaKnown RBP12.42□□□□□ -0.42
RAB40B-204ENST00000571554 CLDN15P56746 228 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 CLDN20P56880 219 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 SIRPAP78324 504 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 KRT71Q3SY84 523 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 XKR7Q5GH72 579 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 FBXW10Q5XX13 1052 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 MFSD12Q6NUT3 480 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 CHMP1BQ7LBR1 199 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 KRTCAP2Q8N6L1 136 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 CDRT4Q8N9R6 151 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 OR4C3Q8NH37 302 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 CEP70Q8NHQ1 597 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 FIG4Q92562 907 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 FAM120BQ96EK7 910 aaKnown RBP12.42□□□□□ -0.42
RAB40B-204ENST00000571554 C1GALT1C1Q96EU7 318 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 DTNBP1Q96EV8 351 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 ZNF764Q96H86 408 aaPredicted RBP12.42□□□□□ -0.42
RAB40B-204ENST00000571554 PPP3R2Q96LZ3 170 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 NPAS1Q99742 590 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 SFXN3Q9BWM7 321 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 PTGES2Q9H7Z7 377 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 RASSF1Q9NS23 344 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 SIRT3Q9NTG7 399 aaPredicted RBP12.42□□□□□ -0.42
RAB40B-204ENST00000571554 ACSS1Q9NUB1 689 aaPredicted RBP12.42□□□□□ -0.42
RAB40B-204ENST00000571554 ZCCHC3Q9NUD5 404 aaKnown RBP12.42□□□□□ -0.42
RAB40B-204ENST00000571554 GALNT8Q9NY28 637 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 JKAMPQ9P055 326 aa12.42□□□□□ -0.42
RAB40B-204ENST00000571554 MRPS18CQ9Y3D5 142 aaKnown RBP12.42□□□□□ -0.42
RAB40B-204ENST00000571554 A0A1W2PNV4 684 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 SLC22A20A6NK97 555 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 TMEM114B3SHH9 223 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 HCRTR2O43614 444 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 ITM2AO43736 263 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 TYROBPO43914 113 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 SMNDC1O75940 238 aaKnown RBP eCLIP12.41□□□□□ -0.42
RAB40B-204ENST00000571554 KCNK2O95069 426 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 OXSR1O95747 527 aaPredicted RBP12.41□□□□□ -0.42
RAB40B-204ENST00000571554 IL18BPO95998 194 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 OPN1LWP04000 364 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 ALOX5P09917 674 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 PEPDP12955 493 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 MAP3K8P41279 467 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 IST1P53990 364 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 ZNF844Q08AG5 666 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 LASP1Q14847 261 aaKnown RBP12.41□□□□□ -0.42
RAB40B-204ENST00000571554 POU4F3Q15319 338 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 VPS26BQ4G0F5 336 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 ATP6AP1LQ52LC2 224 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 C6orf136Q5SQH8 315 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 IL23RQ5VWK5 629 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 PPP4R4Q6NUP7 873 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 WDR93Q6P2C0 686 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 VWA1Q6PCB0 445 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 R3HCC1LQ7Z5L2 792 aaKnown RBP12.41□□□□□ -0.42
RAB40B-204ENST00000571554 CDC20BQ86Y33 519 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 MEIOBQ8N635 442 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 COX18Q8N8Q8 333 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 CNEP1R1Q8N9A8 125 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 FNDC5Q8NAU1 212 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 PPP1R14CQ8TAE6 165 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 FAM222BQ8WU58 562 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 HOXB13Q92826 284 aaPredicted RBP12.41□□□□□ -0.42
RAB40B-204ENST00000571554 CDS1Q92903 461 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 TUBGCP3Q96CW5 907 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 SH3YL1Q96HL8 342 aaPredicted RBP12.41□□□□□ -0.42
RAB40B-204ENST00000571554 ZNF845Q96IR2 970 aaPredicted RBP12.41□□□□□ -0.42
RAB40B-204ENST00000571554 KLHDC3Q9BQ90 382 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 PINK1Q9BXM7 581 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 PARD6BQ9BYG5 372 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 CENPHQ9H3R5 247 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 GIN1Q9NXP7 522 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 ATP6V1HQ9UI12 483 aa12.41□□□□□ -0.42
RAB40B-204ENST00000571554 FOXD3Q9UJU5 478 aaPredicted RBP12.41□□□□□ -0.42
RAB40B-204ENST00000571554 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 NPIPA5A0A0B4J1W7 369 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 A0A1W2PRB8 838 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 NPIPA7E9PJI5 369 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 NDUFB5O43674 189 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 TNFSF13O75888 250 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 HSPA4LO95757 839 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 C6orf47O95873 294 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 HMGN2P05204 90 aaKnown RBP12.4□□□□□ -0.42
RAB40B-204ENST00000571554 IFI6P09912 130 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 NPIPA8P0DM63 369 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 MAPK1P28482 360 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 ETV4P43268 484 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 SERPINB4P48594 390 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 PRR5P85299 388 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 C17orf67Q0P5P2 114 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 TP53BP2Q13625 1128 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 GANABQ14697 944 aaKnown RBP12.4□□□□□ -0.42
RAB40B-204ENST00000571554 CHI3L2Q15782 390 aa12.4□□□□□ -0.42
RAB40B-204ENST00000571554 PDCD2Q16342 344 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms