RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 CYP3A5P20815 502 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 WARSP23381 471 aaKnown RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 ADORA2BP29275 332 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 RBMS1P29558 406 aaKnown RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 MATKP42679 507 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SULT1E1P49888 294 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 CRYBB1P53674 252 aaPredicted RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 AIF1P55008 147 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SLC3A1Q07837 685 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 ARL16Q0P5N6 197 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 NAB1Q13506 487 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 GAMTQ14353 236 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 GRB14Q14449 540 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 EFTUD2Q15029 972 aaKnown RBP eCLIP3.28□□□□□ -1.88
UBR1-211ENST00000569971 TPSAB1Q15661 275 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SLC1A5Q15758 541 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 DPYSL2Q16555 572 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 PARP6Q2NL67 630 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SLC25A52Q3SY17 297 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 PDLIM3Q53GG5 364 aaPredicted RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 TAF1BQ53T94 588 aaPredicted RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 PRAMEF7Q5VXH5 474 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 PMF1Q6P1K2 205 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 NEK5Q6P3R8 708 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 GDPD4Q6W3E5 623 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 RBMS3Q6XE24 437 aaKnown RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 WDR88Q6ZMY6 472 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 BTN2A1Q7KYR7 527 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 TRPT1Q86TN4 253 aaKnown RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 LRRC6Q86X45 466 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 ECHDC2Q86YB7 292 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 STHQ8IWL8 128 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 KIRREL3Q8IZU9 778 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 BATF2Q8N1L9 274 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 PQLC3Q8N755 202 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 STPG4Q8N801 248 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 C12orf29Q8N999 325 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 BANPQ8N9N5 519 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SIDT2Q8NBJ9 832 aaKnown RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 SLC37A3Q8NCC5 494 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 KLHDC9Q8NEP7 349 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 TMEM185AQ8NFB2 350 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 RAB3IL1Q8TBN0 382 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 TCP10LQ8TDR4 215 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 HPSE2Q8WWQ2 592 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 HTR3CQ8WXA8 447 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SEPT8Q92599 483 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 CDKL2Q92772 493 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 C18orf25Q96B23 403 aaPredicted RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 ULK4Q96C45 1275 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 ANKRD27Q96NW4 1050 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 QKIQ96PU8 341 aaKnown RBP eCLIP3.28□□□□□ -1.884e-8■■■■■ 33.1
UBR1-211ENST00000569971 EBNA1BP2Q99848 306 aaKnown RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 MED10Q9BTT4 135 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 NTMT1Q9BV86 223 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 TRIM62Q9BVG3 475 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 TSSK1BQ9BXA7 367 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 DPEP2Q9H4A9 486 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 NXF3Q9H4D5 531 aaKnown RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 ZDHHC6Q9H6R6 413 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SAR1AQ9NR31 198 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 TBC1D13Q9NVG8 400 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 GPATCH2LQ9NWQ4 482 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 HPF1Q9NWY4 346 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 FLRT3Q9NZU0 649 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 TUBGCP4Q9UGJ1 667 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 STAP1Q9ULZ2 295 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 RPL26L1Q9UNX3 145 aaKnown RBP3.28□□□□□ -1.88
UBR1-211ENST00000569971 STK38LQ9Y2H1 464 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SH3GLB1Q9Y371 365 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 Q9Y3F1 56 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 MAD1L1Q9Y6D9 718 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 COLEC10Q9Y6Z7 277 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 SBF1O95248 1867 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 ZNF236Q9UL36 1845 aa3.28□□□□□ -1.88
UBR1-211ENST00000569971 A0A0G2JND7 137 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 TRBV4-1A0A0J9YWV2 114 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 RGSL1A5PLK6 1076 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 GLTPD2A6NH11 291 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 FAM159BA6NKW6 160 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 ERI2A8K979 691 aaKnown RBP3.27□□□□□ -1.89
UBR1-211ENST00000569971 A8MVM7 634 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 ZNF732B4DXR9 585 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 TRIM49D1C9J1S8 452 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 GOLGA8RI6L899 631 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 EEF2KO00418 725 aaKnown RBP3.27□□□□□ -1.89
UBR1-211ENST00000569971 CYB561D2O14569 222 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 KLF11O14901 512 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 BIRC5O15392 142 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 BUB3O43684 328 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 CCDC22O60826 627 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 PTBP3O95758 552 aaKnown RBP3.27□□□□□ -1.89
UBR1-211ENST00000569971 TGFAP01135 160 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 IL1BP01584 269 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 KRT16P08779 473 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 FAM200BP0CF97 657 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 FGF3P11487 239 aaPredicted RBP3.27□□□□□ -1.89
UBR1-211ENST00000569971 CCDC130P13994 396 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 PAX1P15863 534 aa3.27□□□□□ -1.89
UBR1-211ENST00000569971 PGAM1P18669 254 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms