RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 HUS1BQ8NHY5 278 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 RAD51AP1Q96B01 352 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 SORCS2Q96PQ0 1159 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 TSSK6Q9BXA6 273 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 SLC19A3Q9BZV2 496 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 PRO3102Q9H379 93 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 NMNAT1Q9HAN9 279 aaPredicted RBP11.24□□□□□ -0.61
SPG7-222ENST00000569820 KCNK12Q9HB15 430 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 EMC7Q9NPA0 242 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 COA4Q9NYJ1 87 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 KLF15Q9UIH9 416 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 YARS2Q9Y2Z4 477 aaKnown RBP11.24□□□□□ -0.61
SPG7-222ENST00000569820 LINC00587B1AMM8 73 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 KHNYNO15037 678 aaKnown RBP11.24□□□□□ -0.61
SPG7-222ENST00000569820 ANXA3P12429 323 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 STOMP27105 288 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 MAT2AP31153 395 aaKnown RBP11.24□□□□□ -0.61
SPG7-222ENST00000569820 CRATP43155 626 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 EVX1P49640 407 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 AGFG1P52594 562 aaKnown RBP11.24□□□□□ -0.61
SPG7-222ENST00000569820 GAB1Q13480 694 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 TSTA3Q13630 321 aaPredicted RBP11.24□□□□□ -0.61
SPG7-222ENST00000569820 CRTC2Q53ET0 693 aaPredicted RBP11.24□□□□□ -0.61
SPG7-222ENST00000569820 BCL2L15Q5TBC7 163 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 LUZP2Q86TE4 346 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 SLC44A3Q8N4M1 653 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 OR4D10Q8NGI6 311 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 NRTNQ99748 197 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 SPOCK3Q9BQ16 436 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 MENTQ9BUN1 341 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 DUSP26Q9BV47 211 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 C8orf33Q9H7E9 229 aaPredicted RBP11.24□□□□□ -0.61
SPG7-222ENST00000569820 BRD7Q9NPI1 651 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 CUEDC1Q9NWM3 386 aaPredicted RBP11.24□□□□□ -0.61
SPG7-222ENST00000569820 SLC17A4Q9Y2C5 497 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 GSTK1Q9Y2Q3 226 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 DYRK1BQ9Y463 629 aa11.24□□□□□ -0.61
SPG7-222ENST00000569820 C1orf226A1L170 272 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 PIPSLA2A3N6 862 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 SHISA7A6NL88 538 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 SLC30A4O14863 429 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 CASKO14936 926 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 CEACAM5P06731 702 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 C1GALT1C1LP0DN25 315 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 ACP5P13686 325 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 XCR1P46094 333 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 ATP12AP54707 1039 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
SPG7-222ENST00000569820 MRPS21P82921 87 aaKnown RBP11.23□□□□□ -0.61
SPG7-222ENST00000569820 HSF2Q03933 536 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 RBBP4Q09028 425 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 LRRC32Q14392 662 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 SLBPQ14493 270 aaKnown RBP eCLIP11.23□□□□□ -0.61
SPG7-222ENST00000569820 PLK5Q496M5 336 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 MED27Q6P2C8 311 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 LRFN4Q6PJG9 635 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 CASP12Q6UXS9 341 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 ZNF655Q8N720 491 aaPredicted RBP11.23□□□□□ -0.61
SPG7-222ENST00000569820 OR11H4Q8NGC9 324 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 SLC5A11Q8WWX8 675 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 GEMIN6Q8WXD5 167 aaKnown RBP11.23□□□□□ -0.61
SPG7-222ENST00000569820 SIPA1Q96FS4 1042 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 MRGPRX1Q96LB2 322 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 SLC6A18Q96N87 628 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 EFCAB11Q9BUY7 163 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 SYNDIG1Q9H7V2 258 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TBC1D3DA0A087WVF3 549 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TBC1D3IA0A087WXS9 549 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TBC1D3EA0A087X179 549 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TBC1D3KA0A087X1G2 549 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 ARRDC5A6NEK1 342 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TBC1D3FA6NER0 549 aaPredicted RBP11.23□□□□□ -0.61
SPG7-222ENST00000569820 PRR19A6NJB7 356 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TBC1D3LB9A6J9 549 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 ABCD4O14678 606 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 DHFRP00374 187 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 SLC35G4P0C7Q5 338 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TBC1D3HP0C7X1 549 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 SLC6A1P30531 599 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 RPL35P42766 123 aaKnown RBP11.23□□□□□ -0.61
SPG7-222ENST00000569820 GSTM5P46439 218 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 MEOX2P50222 304 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 ZNF81P51508 661 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 HMGA2P52926 109 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 RAE1P78406 368 aaKnown RBP11.23□□□□□ -0.61
SPG7-222ENST00000569820 RELQ04864 619 aaPredicted RBP11.23□□□□□ -0.61
SPG7-222ENST00000569820 PRAMEF14Q5SWL7 426 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 PRAMEF13Q5VWM6 474 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TBC1D3GQ6DHY5 549 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TBC1D3CQ6IPX1 549 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TMEM92Q6UXU6 159 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TBC1D3Q8IZP1 549 aaPredicted RBP11.23□□□□□ -0.61
SPG7-222ENST00000569820 OR11H7Q8NGC8 314 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 OR6C4Q8NGE1 309 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 OR5T2Q8NGG2 359 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TM9SF4Q92544 642 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 TIMM29Q9BSF4 260 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 HDHD2Q9H0R4 259 aa11.23□□□□□ -0.61
SPG7-222ENST00000569820 RDH8Q9NYR8 311 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms