RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 BEND6Q5SZJ8 279 aaPredicted RBP18.39■□□□□ 0.53
CLK3-225ENST00000569063 LRRC34Q8IZ02 419 aa18.39■□□□□ 0.53
CLK3-225ENST00000569063 OR4C3Q8NH37 302 aa18.39■□□□□ 0.53
CLK3-225ENST00000569063 FBXO30Q8TB52 745 aa18.39■□□□□ 0.53
CLK3-225ENST00000569063 PPP1R36Q96LQ0 422 aa18.39■□□□□ 0.53
CLK3-225ENST00000569063 STACQ99469 402 aa18.39■□□□□ 0.53
CLK3-225ENST00000569063 PAIP2Q9BPZ3 127 aaKnown RBP18.39■□□□□ 0.53
CLK3-225ENST00000569063 DUSP26Q9BV47 211 aa18.39■□□□□ 0.53
CLK3-225ENST00000569063 CXorf36Q9H7Y0 433 aa18.39■□□□□ 0.53
CLK3-225ENST00000569063 PTGES2Q9H7Z7 377 aa18.39■□□□□ 0.53
CLK3-225ENST00000569063 HHATLQ9HCP6 504 aa18.39■□□□□ 0.53
CLK3-225ENST00000569063 DUSP22Q9NRW4 184 aa18.39■□□□□ 0.53
CLK3-225ENST00000569063 RPH3AQ9Y2J0 694 aaPredicted RBP18.39■□□□□ 0.53
CLK3-225ENST00000569063 SNX8Q9Y5X2 465 aa18.39■□□□□ 0.53
CLK3-225ENST00000569063 PKDREJQ9NTG1 2253 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 ALG1L2C9J202 215 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 H0Y3Z8 333 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 SOX30O94993 753 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 C6orf47O95873 294 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 ZNF708P17019 499 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 TBXA2RP21731 343 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 BMP5P22003 454 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 CCT3P49368 545 aaKnown RBP18.38■□□□□ 0.53
CLK3-225ENST00000569063 ZNF136P52737 540 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 CLDN18P56856 261 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 WDR4P57081 412 aaKnown RBP18.38■□□□□ 0.53
CLK3-225ENST00000569063 SRYQ05066 204 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 BST1Q10588 318 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 HHATQ5VTY9 493 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 ANKRD42Q8N9B4 389 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 RELL2Q8NC24 303 aaPredicted RBP18.38■□□□□ 0.53
CLK3-225ENST00000569063 OR56A1Q8NGH5 318 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 C1GALT1C1Q96EU7 318 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 LURAP1Q96LR2 239 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 YIPF4Q9BSR8 244 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 G6PC3Q9BUM1 346 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 BTBD2Q9BX70 525 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 PIGUQ9H490 435 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 SLC24A3Q9HC58 644 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 NEUROD4Q9HD90 331 aa18.38■□□□□ 0.53
CLK3-225ENST00000569063 TMEM120BA0PK00 339 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 LINC01387J3KSC0 135 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 SYT5O00445 386 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 OXSR1O95747 527 aaPredicted RBP18.37■□□□□ 0.53
CLK3-225ENST00000569063 HK1P19367 917 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 CTSSP25774 331 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 DLX5P56178 289 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 LASP1Q14847 261 aaKnown RBP18.37■□□□□ 0.53
CLK3-225ENST00000569063 FBXL19-AS1Q494R0 122 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 GLYR1Q49A26 553 aaPredicted RBP18.37■□□□□ 0.53
CLK3-225ENST00000569063 CDC73Q6P1J9 531 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 FIGNL1Q6PIW4 674 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 GALNT10Q86SR1 603 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 COX18Q8N8Q8 333 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 C9orf106Q8NAJ2 232 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 GOT1L1Q8NHS2 421 aaPredicted RBP18.37■□□□□ 0.53
CLK3-225ENST00000569063 SFXN5Q8TD22 340 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 MOAP1Q96BY2 351 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 TM9SF2Q99805 663 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 ACTRT3Q9BYD9 372 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 MEAF6Q9HAF1 191 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 MCCC2Q9HCC0 563 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 UBQLN4Q9NRR5 601 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 PNPOQ9NVS9 261 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 GPATCH2Q9NW75 528 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 KCNN3Q9UGI6 736 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 LRBAP50851 2863 aa18.37■□□□□ 0.53
CLK3-225ENST00000569063 CLCA1A8K7I4 914 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 IL18BPO95998 194 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 PEPDP12955 493 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 TCEA1P23193 301 aaKnown RBP18.36■□□□□ 0.53
CLK3-225ENST00000569063 ASCL1P50553 236 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 HBA1P69905 142 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 POU6F2P78424 691 aaPredicted RBP18.36■□□□□ 0.53
CLK3-225ENST00000569063 TLE4Q04727 773 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 PGS1Q32NB8 556 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 ZAR1Q86SH2 424 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 JADE3Q92613 823 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 CDS1Q92903 461 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 WNT2BQ93097 391 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 OTUB1Q96FW1 271 aaPredicted RBP18.36■□□□□ 0.53
CLK3-225ENST00000569063 ZFP3Q96NJ6 502 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 NUF2Q9BZD4 464 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 TMBIM4Q9HC24 238 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 FBXO34Q9NWN3 711 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 CLCF1Q9UBD9 225 aa18.36■□□□□ 0.53
CLK3-225ENST00000569063 KIAA1549Q9HCM3 1950 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 CFLARO15519 480 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 NDUFB5O43674 189 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 RCBTB2O95199 551 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 KRT16P08779 473 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 LBPP18428 481 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 OPRM1P35372 400 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 MAGOHP61326 146 aaKnown RBP18.35■□□□□ 0.53
CLK3-225ENST00000569063 TP53BP2Q13625 1128 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 SPDYE7PQ495Y7 208 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 RAET1LQ5VY80 246 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 ARSKQ6UWY0 536 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 OR8J2Q8NGG1 315 aa18.35■□□□□ 0.53
CLK3-225ENST00000569063 TLCD1Q96CP7 247 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms