RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 ALG8Q9BVK2 526 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 SPRTNQ9H040 489 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 LRRN3Q9H3W5 708 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 C20orf141Q9NUB4 165 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 NLGN3Q9NZ94 848 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 WDR45Q9Y484 360 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 DSPPQ9NZW4 1301 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 THSD7BQ9C0I4 1608 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 FRMPD3Q5JV73 1810 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 IGKV1-8A0A0C4DH67 115 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 FABP7O15540 132 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 AKAP8O43823 692 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 OR5F1O95221 314 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 EIF4EP06730 217 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 PVRP15151 417 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 NT5EP21589 574 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 PPM1AP35813 382 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 PSMB10P40306 273 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 EPHA5P54756 1037 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 FAPQ12884 760 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 EXOSC7Q15024 291 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 TRAM2Q15035 370 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 SLC25A35Q3KQZ1 300 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 TP53I3Q53FA7 332 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 VITQ6UXI7 678 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 IKBIPQ70UQ0 350 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 REM2Q8IYK8 340 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 ELMOD2Q8IZ81 293 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 MORN4Q8NDC4 146 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 OR52E1Q8NGJ3 308 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 SUN3Q8TAQ9 357 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF671Q8TAW3 534 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 APOBEC4Q8WW27 367 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 ZMYND19Q96E35 227 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 SNX18Q96RF0 628 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 ATF6BQ99941 703 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 TEX12Q9BXU0 123 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 MED28Q9H204 178 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 SPATA2Q9UM82 520 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 IQCMA0A1B0GVH7 501 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 A0A1W2PRQ8 180 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 LRIT2A6NDA9 550 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 SSNA1O43805 119 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 PAPLNO95428 1278 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 ADH1CP00326 375 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 MT-ND4P03905 459 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 PIPP12273 146 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 HIST1H1TP22492 207 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 HOXD11P31277 338 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 PCBP4P57723 403 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 C21orf58P58505 322 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 PRR5P85299 388 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 ELAVL3Q14576 367 aaKnown RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 POU4F3Q15319 338 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 MLF2Q15773 248 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF542PQ5EBM4 170 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 SFRP4Q6FHJ7 346 aaPredicted RBP8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 ANKRD54Q6NXT1 300 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 FAAP20Q6NZ36 180 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 QSOX2Q6ZRP7 698 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 RFPL4BQ6ZWI9 263 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 GPR135Q8IZ08 494 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 RAB42Q8N4Z0 105 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 FAM26EQ8N5C1 309 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 RFLNBQ8N5W9 214 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 CCL4L1Q8NHW4 92 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 FANK1Q8TC84 345 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 CHFRQ96EP1 664 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 PPP1R16AQ96I34 528 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 RNF32Q9H0A6 362 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 SLC25A18Q9H1K4 315 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 TMEM74BQ9NUR3 256 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 SLC23A1Q9UHI7 598 aa8.38□□□□□ -1.07
HDGFL3-206ENST00000568294 SERTM1A2A2V5 107 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 GRXCR1A8MXD5 290 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 H0Y8X5 98 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 ORC5O43913 435 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 DPM1O60762 260 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 LGI1O95970 557 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 CXCL10P02778 98 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 HRGP04196 525 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 HLA-DPB1P04440 258 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF888P0CJ79 500 aaPredicted RBP8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 BMP7P18075 431 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 AGFG1P52594 562 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 OR12D2P58182 307 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 GNG2P59768 71 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 PPP3R1P63098 170 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF33BQ06732 778 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 ST3GAL3Q11203 375 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 ASAH1Q13510 395 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 HNRNPA1L2Q32P51 320 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 POMZP3Q6PJE2 187 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 LYPD4Q6UWN0 246 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 GDF7Q7Z4P5 450 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 NR2C2APQ86WQ0 139 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 GDPD1Q8N9F7 314 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 GATSQ8NAP1 163 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 OR8K3Q8NH51 312 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 SETD6Q8TBK2 473 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms