RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ANKRA2Q9H9E1 313 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 FGF21Q9NSA1 209 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 PRODH2Q9UF12 536 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 CFL2Q9Y281 166 aa13.57□□□□□ -0.24
COMMD4-221ENST00000567935 ZNF443Q9Y2A4 671 aaPredicted RBP13.57□□□□□ -0.24
COMMD4-221ENST00000567935 ANKRD17O75179 2603 aaKnown RBP13.57□□□□□ -0.24
COMMD4-221ENST00000567935 RP1P56715 2156 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 SCN2AQ99250 2005 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 LY6G6EA0A0G2JKS1 128 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 CPED1A4D0V7 1026 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 AGAP5A6NIR3 686 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 J3KTA2 159 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 FFAR1O14842 300 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 MRPS14O60783 128 aaKnown RBP13.56□□□□□ -0.24
COMMD4-221ENST00000567935 MITFO75030 526 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-221ENST00000567935 SEC24DO94855 1032 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-221ENST00000567935 TFAP2AP05549 437 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 CT62P0C5K7 136 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 S1PR1P21453 382 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 FBLP22087 321 aaKnown RBP13.56□□□□□ -0.24
COMMD4-221ENST00000567935 TRHRP34981 398 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-221ENST00000567935 IFNGR2P38484 337 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 YAP1P46937 504 aaKnown RBP13.56□□□□□ -0.24
COMMD4-221ENST00000567935 PSMD4P55036 377 aaKnown RBP13.56□□□□□ -0.24
COMMD4-221ENST00000567935 ISL1P61371 349 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 MAT1AQ00266 395 aaKnown RBP13.56□□□□□ -0.24
COMMD4-221ENST00000567935 IL1RL1Q01638 556 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 FUT7Q11130 342 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 KCNAB1Q14722 419 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 CYP27C1Q4G0S4 372 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 FGD3Q5JSP0 725 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 SNAP47Q5SQN1 464 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 C6orf141Q5SZD1 244 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 RNF220Q5VTB9 566 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 GUSBP11Q6P575 273 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 BORAQ6PGQ7 559 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 TTLL10Q6ZVT0 673 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 GALNT5Q7Z7M9 940 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 DEPDC4Q8N2C3 294 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 OR52J3Q8NH60 311 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 GPR151Q8TDV0 419 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 SNRNP27Q8WVK2 155 aaKnown RBP13.56□□□□□ -0.24
COMMD4-221ENST00000567935 SLC35B4Q969S0 331 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 ZNF501Q96CX3 271 aaPredicted RBP13.56□□□□□ -0.24
COMMD4-221ENST00000567935 NUDT22Q9BRQ3 303 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 LRRN3Q9H3W5 708 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 ZNF304Q9HCX3 659 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 VCX3AQ9NNX9 186 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 LANCL2Q9NS86 450 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 TMEM9Q9P0T7 183 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 A4GNTQ9UNA3 340 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 PCDHGA8Q9Y5G5 932 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 U3KQA8 63 aa13.56□□□□□ -0.24
COMMD4-221ENST00000567935 AP3D1O14617 1153 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 FMO6PO60774 539 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 HBQ1P09105 142 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 CKMT1AP12532 417 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 MYF5P13349 255 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 NID1P14543 1247 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 ATP6V1B1P15313 513 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 FOLR1P15328 257 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 IL7RP16871 459 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 ELAVL4P26378 380 aaKnown RBP13.55□□□□□ -0.24
COMMD4-221ENST00000567935 TTKP33981 857 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 GABRA3P34903 492 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 UGT2B15P54855 530 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 CD47Q08722 323 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 COX10Q12887 443 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 GANABQ14697 944 aaKnown RBP13.55□□□□□ -0.24
COMMD4-221ENST00000567935 EXOSC7Q15024 291 aaKnown RBP13.55□□□□□ -0.24
COMMD4-221ENST00000567935 ANKRD34AQ69YU3 496 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 ZNF770Q6IQ21 691 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-221ENST00000567935 ARHGAP22Q7Z5H3 698 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 AQP11Q8NBQ7 271 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 OR4D11Q8NGI4 311 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 OR6T1Q8NGN1 323 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 CNDP2Q96KP4 475 aaKnown RBP13.55□□□□□ -0.24
COMMD4-221ENST00000567935 ART5Q96L15 291 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 FUZQ9BT04 418 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 G6PC3Q9BUM1 346 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 RSPO3Q9BXY4 272 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-221ENST00000567935 DGCR6LQ9BY27 220 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 RBCK1Q9BYM8 510 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 FOLH1BQ9HBA9 442 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 Q9N2J8 555 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 MKKSQ9NPJ1 570 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-221ENST00000567935 NDOR1Q9UHB4 597 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 CLDN16Q9Y5I7 305 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 RELNP78509 3460 aa13.55□□□□□ -0.24
COMMD4-221ENST00000567935 AHCTF1Q8WYP5 2266 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 SH3PXD2BA1X283 911 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 TGFBR3LH3BV60 316 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 M0R3H8 397 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 PCDH17O14917 1159 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 FCMRO60667 390 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 OR5F1O95221 314 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 EPPINO95925 133 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 RPLP0P05388 317 aaKnown RBP13.54□□□□□ -0.24
COMMD4-221ENST00000567935 CCNYL3P0C7X3 344 aa13.54□□□□□ -0.24
COMMD4-221ENST00000567935 ALAS2P22557 587 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms