RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 MED12Q93074 2177 aa4.34□□□□□ -1.72
CLK3-219ENST00000567805 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 IGLV3-32A0A0A0MS00 114 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 GXYLT2A0PJZ3 443 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 CLCA1A8K7I4 914 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 B4DXG7 233 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 EEF1E1-BLOC1S5C9J1V9 151 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 TM9SF1O15321 606 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 BIRC5O15392 142 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 RGS16O15492 202 aaPredicted RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 CTIFO43310 598 aaKnown RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 EEF1E1O43324 174 aaKnown RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 EMC8O43402 210 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 HCRTR2O43614 444 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 PEX11AO75192 247 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 SKAP2O75563 359 aaPredicted RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 SOX30O94993 753 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 KCNK2O95069 426 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 NKX2-2O95096 273 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 SNUPNO95149 360 aaKnown RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 UTS2O95399 124 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 HSPA4LO95757 839 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 ANGPTL1O95841 491 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 TUBBP07437 444 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 NGFRP08138 427 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 TMIGD3P0DMS9 266 aaPredicted RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 PEPDP12955 493 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 CREB1P16220 341 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 ZNF708P17019 499 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 HK1P19367 917 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 POU3F2P20265 443 aaPredicted RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 PRPS1L1P21108 318 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 TBXA2RP21731 343 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 LCN1P31025 176 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 UQCRC1P31930 480 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 ARRB2P32121 409 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 GABRA3P34903 492 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 KIR2DL3P43628 341 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 RFX3P48380 749 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 GSK3AP49840 483 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 PRKAG1P54619 331 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 EEFSECP57772 596 aaKnown RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 B3GALT5-AS1P59052 145 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 SORDQ00796 357 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 OCRLQ01968 901 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 SRYQ05066 204 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 ZNF844Q08AG5 666 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 STX5Q13190 355 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 MAD2L1Q13257 205 aaPredicted RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 PTGR1Q14914 329 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.33□□□□□ -1.72
CLK3-219ENST00000567805 SMU1Q2TAY7 513 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 GRAMD1BQ3KR37 738 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 KRT71Q3SY84 523 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 GLYR1Q49A26 553 aaPredicted RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 FLYWCH1Q4VC44 716 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 CPTPQ5TA50 214 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 RAET1LQ5VY80 246 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 OR2A2Q6IF42 318 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 MFSD12Q6NUT3 480 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 CHMP1BQ7LBR1 199 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 SZRD1Q7Z422 152 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 KIF18BQ86Y91 864 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 GRAMD2AQ8IUY3 354 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 NUDCD3Q8IVD9 361 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 MISPQ8IVT2 679 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 ZZZ3Q8IYH5 903 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 KIRREL3Q8IZU9 778 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 FNDC5Q8NAU1 212 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 SLC16A11Q8NCK7 471 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 OR7A2PQ8NGA2 310 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 PSMA8Q8TAA3 256 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 PPP1R14CQ8TAE6 165 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 FAM110BQ8TC76 370 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 AGR3Q8TD06 166 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 GPR151Q8TDV0 419 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 DUSP19Q8WTR2 217 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 FAM222BQ8WU58 562 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 PIK3R3Q92569 461 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 SLC9A6Q92581 669 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 FAM120BQ96EK7 910 aaKnown RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 C1GALT1C1Q96EU7 318 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 GIMAP5Q96F15 307 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 RMND5BQ96G75 393 aaPredicted RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 C3orf30Q96M34 536 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 ZIM3Q96PE6 472 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 STACQ99469 402 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 PRPF18Q99633 342 aaKnown RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 PIGQQ9BRB3 760 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 G6PC3Q9BUM1 346 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 SFXN3Q9BWM7 321 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 PARD6BQ9BYG5 372 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 RTN4RQ9BZR6 473 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 PIGMQ9H3S5 423 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 DSN1Q9H410 356 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 NEUROD4Q9HD90 331 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 EQTNQ9NQ60 294 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 DUSP22Q9NRW4 184 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 SIRT3Q9NTG7 399 aaPredicted RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 ZCCHC3Q9NUD5 404 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms