RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 PKMYT1Q99640 499 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 MAN2C1Q9NTJ4 1040 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 KCNIP3Q9Y2W7 256 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 SNX11Q9Y5W9 270 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 BTAF1O14981 1849 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 TRAPPC13A5PLN9 417 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 FAM227AF5H4B4 570 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 ZNF780AO75290 641 aaPredicted RBP11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 KCNK5O95279 499 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 UBBP0CG47 229 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 UBCP0CG48 685 aaKnown RBP11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 DLEU7Q6UYE1 221 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 OR5T2Q8NGG2 359 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 OR10K1Q8NGX5 313 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 SLC39A13Q96H72 371 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 DGAT2Q96PD7 388 aa11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 PNO1Q9NRX1 252 aaKnown RBP11.71□□□□□ -0.53
CSPG4P13-202ENST00000567704 RFXAPO00287 272 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR7A17O14581 309 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZNF208O43345 1280 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 IFNA17P01571 189 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 SNRPBP14678 240 aaKnown RBP11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 PRKCAP17252 672 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 PSMB1P20618 241 aaKnown RBP11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 CCKBRP32239 447 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 PSPHP78330 225 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 LMAN2Q12907 356 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 KREMEN2Q8NCW0 462 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR1J4Q8NGS1 313 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 TMEM40Q8WWA1 233 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 SMPDL3BQ92485 455 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 C4orf36Q96KX1 117 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 SORBS1Q9BX66 1292 aaKnown RBP11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 NRAPQ86VF7 1730 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 NHSQ6T4R5 1651 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 SOX1O00570 391 aaPredicted RBP11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 OIP5O43482 229 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 PRICKLE3O43900 615 aaPredicted RBP11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 GPR32O75388 356 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 STC2O76061 302 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 APODP05090 189 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 SPNP16150 400 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 CERS1P27544 350 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 RBMS1P29558 406 aaKnown RBP11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC11A1P49279 550 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 CTSL3PQ5NE16 218 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 HACD4Q5VWC8 232 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZNF550Q7Z398 422 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR4N5Q8IXE1 308 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 HCAR2Q8TDS4 363 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 PHB2Q99623 299 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 CCDC86Q9H6F5 360 aaKnown RBP11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZNF701Q9NV72 531 aaPredicted RBP11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLCO3A1Q9UIG8 710 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 TMEM14AQ9Y6G1 99 aa11.71□□□□□ -0.54
CSPG4P13-202ENST00000567704 C1orf226A1L170 272 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 GYPBP06028 91 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 ATXN1LP0C7T5 689 aaKnown RBP11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 PPP3CBP16298 524 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 PTGER1P34995 402 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 NNATQ16517 81 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 MAPK14Q16539 360 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 REM2Q8IYK8 340 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 MAP6Q96JE9 813 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 HS6ST2Q96MM7 605 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 DHRS9Q9BPW9 319 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 ORAI3Q9BRQ5 295 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 PBDC1Q9BVG4 233 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 SMG9Q9H0W8 520 aaKnown RBP11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 EGLN3Q9H6Z9 239 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 TNFRSF12AQ9NP84 129 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 FBXL21Q9UKT6 434 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 MARF1Q9Y4F3 1742 aaKnown RBP11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 NPIPA5E9PKD4 350 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 RNF13O43567 381 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 CSTAP01040 98 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 DRD2P14416 443 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 CCR6P51684 374 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 P2RX3P56373 397 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 AAK1Q2M2I8 961 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 CHRFAM7AQ494W8 412 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 CLVS2Q5SYC1 327 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 TRAM1L1Q8N609 369 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 ACBD4Q8NC06 268 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR5AK2Q8NH90 309 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 NPLOC4Q8TAT6 608 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZNF689Q96CS4 500 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 HRH4Q9H3N8 390 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 COPS7AQ9UBW8 275 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC7A7Q9UM01 511 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 NPIPA1Q9UND3 350 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC6A5Q9Y345 797 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 PRSS21Q9Y6M0 314 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR6C65A6NJZ3 312 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 HSPA12AO43301 675 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 SIX6O95475 246 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 FGF19O95750 216 aa11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 SNAI1O95863 264 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P13-202ENST00000567704 SNRNP70P08621 437 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms