RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SKAP2O75563 359 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-216ENST00000567071 OTCP00480 354 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 ARAFP10398 606 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 BMP4P12644 408 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 NPPBP16860 134 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 CCND1P24385 295 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 SERPINB5P36952 375 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 NR4A2P43354 598 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 CDH11P55287 796 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 FOXA1P55317 472 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 RAB38P57729 211 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 HILS1P60008 231 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 NAA20P61599 178 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 IRF8Q02556 426 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 CHIT1Q13231 466 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 TCHHL1Q5QJ38 904 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-216ENST00000567071 PRAMEF9Q5VWM5 478 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 TIGD3Q6B0B8 471 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 CLEC6AQ6EIG7 209 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 CGB2Q6NT52 195 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 LETMD1Q6P1Q0 360 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 SHQ1Q6PI26 577 aaKnown RBP8.67□□□□□ -1.02
CAPN3-216ENST00000567071 LCTLQ6UWM7 567 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 DEF8Q6ZN54 512 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 CDYL2Q8N8U2 506 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 FAM47BQ8NA70 645 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 C7orf57Q8NEG2 295 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 TRPV3Q8NET8 790 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 STEAP2Q8NFT2 490 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 OR4F6Q8NGB9 312 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 SLC5A11Q8WWX8 675 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 HTRA1Q92743 480 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 NEIL2Q969S2 332 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 CTHRC1Q96CG8 243 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 TMEM41AQ96HV5 264 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 GAL3ST4Q96RP7 486 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 NPLQ9BXD5 320 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-216ENST00000567071 TRIM2Q9C040 744 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 NSRP1Q9H0G5 558 aaKnown RBP8.67□□□□□ -1.02
CAPN3-216ENST00000567071 CBLN4Q9NTU7 201 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 ZDHHC2Q9UIJ5 367 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 ZFP69BQ9UJL9 534 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 GPR52Q9Y2T5 361 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 EMC9Q9Y3B6 208 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 RNF11Q9Y3C5 154 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 RAP2CQ9Y3L5 183 aa8.67□□□□□ -1.02
CAPN3-216ENST00000567071 AZIN1O14977 448 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 CTNSO60931 367 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 ESRRBO95718 433 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 GNAZP19086 355 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 DRD4P21917 467 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 ZFP36P26651 326 aaKnown RBP8.66□□□□□ -1.02
CAPN3-216ENST00000567071 AHRP35869 848 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 LHX2P50458 406 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 RPL14P50914 215 aaKnown RBP8.66□□□□□ -1.02
CAPN3-216ENST00000567071 EFNA4P52798 201 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 PKNOX1P55347 436 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 EEFSECP57772 596 aaKnown RBP8.66□□□□□ -1.02
CAPN3-216ENST00000567071 BTN3A2P78410 334 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 FNDC7Q5VTL7 733 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 BICRALQ6AI39 1079 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 METTL2BQ6P1Q9 378 aaKnown RBP8.66□□□□□ -1.02
CAPN3-216ENST00000567071 ANGPTL8Q6UXH0 198 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 BEND4Q6ZU67 534 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 CPLX4Q7Z7G2 160 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 STK32CQ86UX6 486 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 FBXL14Q8N1E6 418 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 PPP1R36Q96LQ0 422 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 HAUS8Q9BT25 410 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 NPHS2Q9NP85 383 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 GPRC5BQ9NZH0 403 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 HEY2Q9UBP5 337 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 DCTN4Q9UJW0 460 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF225Q9UK10 706 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 DTX4Q9Y2E6 619 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 STK38LQ9Y2H1 464 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 TIMM22Q9Y584 194 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 KCNE2Q9Y6J6 123 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 TENM3Q9P273 2699 aa8.66□□□□□ -1.02
CAPN3-216ENST00000567071 MYOCOSA0A1B0GUC4 107 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 H7C417 338 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 B3GALT2O43825 422 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 CLDN9O95484 217 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 JUNP05412 331 aaKnown RBP8.65□□□□□ -1.02
CAPN3-216ENST00000567071 ENO1P06733 434 aaKnown RBP8.65□□□□□ -1.02
CAPN3-216ENST00000567071 TROVE2P10155 538 aaKnown RBP eCLIP8.65□□□□□ -1.02
CAPN3-216ENST00000567071 ZNF23P17027 643 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 CD22P20273 847 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 PTNP21246 168 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 HMOX2P30519 316 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 STARP49675 285 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 HTR6P50406 440 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 HNRNPFP52597 415 aaKnown RBP8.65□□□□□ -1.02
CAPN3-216ENST00000567071 STXBP1P61764 594 aaKnown RBP8.65□□□□□ -1.02
CAPN3-216ENST00000567071 BSPH1Q075Z2 132 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 GALNT1Q10472 559 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-216ENST00000567071 DOC2AQ14183 400 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 SLBPQ14493 270 aaKnown RBP eCLIP8.65□□□□□ -1.02
CAPN3-216ENST00000567071 CARTPTQ16568 116 aa8.65□□□□□ -1.02
CAPN3-216ENST00000567071 CPSF6Q16630 551 aaKnown RBP eCLIP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms