RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 C12orf4Q9NQ89 552 aa14.67□□□□□ -0.06
COMMD4-215ENST00000566843 SEMA4GQ9NTN9 838 aa14.67□□□□□ -0.06
COMMD4-215ENST00000566843 EMC3Q9P0I2 261 aa14.67□□□□□ -0.06
COMMD4-215ENST00000566843 KHNYNO15037 678 aaKnown RBP14.66□□□□□ -0.06
COMMD4-215ENST00000566843 TMPRSS11DO60235 418 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 SYPP08247 313 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 GIFP27352 417 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 MMP15P51511 669 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 GNA13Q14344 377 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 PRAMEF8Q5VWM4 474 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 PRAMEF7Q5VXH5 474 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 C16orf62Q7Z3J2 963 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 SIAH3Q8IW03 269 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 TOMM5Q8N4H5 51 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 CEP76Q8TAP6 659 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 HAVCR2Q8TDQ0 301 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 ZNF578Q96N58 590 aaPredicted RBP14.66□□□□□ -0.06
COMMD4-215ENST00000566843 GSX2Q9BZM3 304 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 GLIPR2Q9H4G4 154 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 COQ3Q9NZJ6 369 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 MAB21L2Q9Y586 359 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 COL4A3Q01955 1670 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 KIAA0100Q14667 2235 aaKnown RBP14.66□□□□□ -0.06
COMMD4-215ENST00000566843 A0A1B0GVC2 190 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 A6NIN4 97 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 SOCS6O14544 535 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 FGBP02675 491 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 HMGN1P05114 100 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 ACADLP28330 430 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 SSTR2P30874 369 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 SRP54P61011 504 aaKnown RBP14.66□□□□□ -0.06
COMMD4-215ENST00000566843 SUZ12Q15022 739 aaKnown RBP14.66□□□□□ -0.06
COMMD4-215ENST00000566843 TRAM1Q15629 374 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 PLEKHM3Q6ZWE6 761 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 HMGN2P46Q86SG4 172 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 ZNF687Q8N1G0 1237 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 PIAS4Q8N2W9 510 aaPredicted RBP14.66□□□□□ -0.06
COMMD4-215ENST00000566843 ACBD7Q8N6N7 88 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 ANKRD53Q8N9V6 530 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 UXS1Q8NBZ7 420 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 TRMT10AQ8TBZ6 339 aaKnown RBP14.66□□□□□ -0.06
COMMD4-215ENST00000566843 PAWRQ96IZ0 340 aaKnown RBP14.66□□□□□ -0.06
COMMD4-215ENST00000566843 AMDHD1Q96NU7 426 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 ACTR6Q9GZN1 396 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 PELI2Q9HAT8 420 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 HINT3Q9NQE9 182 aaKnown RBP14.66□□□□□ -0.06
COMMD4-215ENST00000566843 TEX10Q9NXF1 929 aaPredicted RBP14.66□□□□□ -0.06
COMMD4-215ENST00000566843 KIF25Q9UIL4 384 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 ADAM29Q9UKF5 820 aa14.66□□□□□ -0.06
COMMD4-215ENST00000566843 RFXAPO00287 272 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 HYAL3O43820 417 aaPredicted RBP14.65□□□□□ -0.06
COMMD4-215ENST00000566843 UBL3O95164 117 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 DRD2P14416 443 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 ATP6V1E1P36543 226 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 ZP1P60852 638 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 ST3GAL3Q11203 375 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 DECR1Q16698 335 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 TCTN1Q2MV58 587 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 CDC73Q6P1J9 531 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 KIAA0907Q7Z7F0 614 aaPredicted RBP14.65□□□□□ -0.06
COMMD4-215ENST00000566843 NRSN1Q8IZ57 195 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 MS4A15Q8N5U1 240 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 TOR1AIP2Q8NFQ8 470 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 GIMAP1Q8WWP7 306 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 IGSF21Q96ID5 467 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 MRPL17Q9NRX2 175 aaKnown RBP14.65□□□□□ -0.06
COMMD4-215ENST00000566843 ZCCHC3Q9NUD5 404 aaKnown RBP14.65□□□□□ -0.06
COMMD4-215ENST00000566843 H2AFY2Q9P0M6 372 aaPredicted RBP14.65□□□□□ -0.06
COMMD4-215ENST00000566843 KLF15Q9UIH9 416 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 INSL5Q9Y5Q6 135 aa14.65□□□□□ -0.06
COMMD4-215ENST00000566843 SLC9B1P1A6NJY1 282 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 ZNF593O00488 134 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-215ENST00000566843 SLC9A3R1O14745 358 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-215ENST00000566843 LEFTY1O75610 366 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 SLC2A10O95528 541 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 NTN1O95631 604 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 CKMP06732 381 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 ANXA11P50995 505 aaKnown RBP14.64□□□□□ -0.07
COMMD4-215ENST00000566843 GBX2P52951 348 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-215ENST00000566843 OR10A3P58181 314 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 RAB33AQ14088 237 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 LIPIQ6XZB0 460 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 TMEM64Q6YI46 380 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 ZNF620Q6ZNG0 422 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 ANKRD33Q7Z3H0 272 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 ASPGQ86U10 573 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 NUDT13Q86X67 352 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 TCEAL8Q8IYN2 117 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 PCNPQ8WW12 178 aaKnown RBP14.64□□□□□ -0.07
COMMD4-215ENST00000566843 ACOT11Q8WXI4 607 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-215ENST00000566843 TOE1Q96GM8 510 aaKnown RBP14.64□□□□□ -0.07
COMMD4-215ENST00000566843 IL17FQ96PD4 163 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 FCRL4Q96PJ5 515 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 ALG8Q9BVK2 526 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 ZDHHC5Q9C0B5 715 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 SPG21Q9NZD8 308 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 PRKAG2Q9UGJ0 569 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 TMEM5Q9Y2B1 443 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 DENND4CQ5VZ89 1909 aa14.64□□□□□ -0.07
COMMD4-215ENST00000566843 KIAA1549LQ6ZVL6 1849 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms