RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 OLAHQ9NV23 265 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 GPATCH2LQ9NWQ4 482 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PKD2L2Q9NZM6 624 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 HMGXB4Q9UGU5 601 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 APPL1Q9UKG1 709 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 RNF11Q9Y3C5 154 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 F5P12259 2224 aa3.87□□□□□ -1.79
LINC00561-201ENST00000565815 HELZP42694 1942 aaKnown RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF638Q14966 1978 aaKnown RBP3.87□□□□□ -1.79
LINC00561-201ENST00000565815 PIRO00625 290 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 MRASO14807 208 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 HPRP00739 348 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ALOX5P09917 674 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ATP6V1B1P15313 513 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GOT1P17174 413 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CKMT2P17540 419 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ATF6P18850 670 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ACP1P24666 158 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CCNCP24863 283 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 FASP25445 335 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CD27P26842 260 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CD151P48509 253 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GABARAPL2P60520 117 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CDKL1Q00532 357 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 MS4A2Q01362 244 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 FASTKQ14296 549 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ATP6AP1Q15904 470 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 C6orf52Q5T4I8 152 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SHQ1Q6PI26 577 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 KCTD18Q6PI47 426 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 TTC33Q6PID6 262 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 TBC1D21Q8IYX1 336 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CLIP4Q8N3C7 705 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 AVL9Q8NBF6 648 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CCNYQ8ND76 341 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 DDHD1Q8NEL9 900 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 OR52K1Q8NGK4 314 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 OR2AJ1Q8NGZ0 328 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 UTP15Q8TED0 518 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 TRUB1Q8WWH5 349 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ATP6V1E2Q96A05 226 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 C18orf25Q96B23 403 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ERLEC1Q96DZ1 483 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 L3HYPDHQ96EM0 354 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ZMAT2Q96NC0 199 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 OSBPL10Q9BXB5 764 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 DUSP16Q9BY84 665 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 RAD21L1Q9H4I0 556 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 COQ10BQ9H8M1 238 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 PELI2Q9HAT8 420 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ANKHQ9HCJ1 492 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 INTS10Q9NVR2 710 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ADA2Q9NZK5 511 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ACTR3BQ9P1U1 418 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GLOD5A6NK44 160 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 H3BSA7 217 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CFLARO15519 480 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SPINT2O43291 252 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 MRPS14O60783 128 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CPNE6O95741 557 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GP1BAP07359 652 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 FGF4P08620 206 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SLC35E2BP0CK96 405 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GRIA1P42261 906 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ARRB1P49407 418 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 RGS7P49802 495 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 HLCSP50747 726 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 NAGLUP54802 743 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 TPI1P60174 286 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 MERTKQ12866 999 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ENPP2Q13822 863 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SLC36A3Q495N2 470 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 RBM48Q5RL73 367 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GPR139Q6DWJ6 353 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 NIPAL1Q6NVV3 410 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 IYDQ6PHW0 289 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 PAPD4Q6PIY7 484 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SUSD1Q6UWL2 747 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GFRALQ6UXV0 394 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SPATA19Q7Z5L4 167 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CMC1Q7Z7K0 106 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 TMEM150AQ86TG1 271 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 IQCHQ86VS3 1027 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 SPATA2LQ8IUW3 424 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CCDC185Q8N715 623 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 LILRB1Q8NHL6 650 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 WFIKKN2Q8TEU8 576 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 RAB2BQ8WUD1 216 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CHPT1Q8WUD6 406 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 RLN3Q8WXF3 142 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ISOC1Q96CN7 298 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 PGLYRP2Q96PD5 576 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GPATCH1Q9BRR8 931 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 GPN2Q9H9Y4 310 aaPredicted RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 AGPAT4Q9NRZ5 378 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 CACNG4Q9UBN1 327 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 ZDHHC2Q9UIJ5 367 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 LSM7Q9UK45 103 aaKnown RBP3.86□□□□□ -1.79
LINC00561-201ENST00000565815 BLOC1S6Q9UL45 172 aa3.86□□□□□ -1.79
LINC00561-201ENST00000565815 RUVBL2Q9Y230 463 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms