RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 TMEM255BQ8WV15 326 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 METTL2AQ96IZ6 378 aaKnown RBP19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 GLIPR2Q9H4G4 154 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 HCN3Q9P1Z3 774 aa19.19■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CNTRLQ7Z7A1 2325 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 HNRNPCL2B2RXH8 293 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CLUP10909 449 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 TSPAN5P62079 268 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CAMK2DQ13557 499 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ZNF311Q5JNZ3 666 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 HENMT1Q5T8I9 393 aaKnown RBP19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 METAP1DQ6UB28 335 aaPredicted RBP19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 RTL4Q6ZR62 310 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CYB561A3Q8NBI2 242 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 UXS1Q8NBZ7 420 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 C17orf47Q8NEP4 570 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SORCS2Q96PQ0 1159 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 OR10A4Q9H209 315 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 OR1F1O43749 312 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ALDOBP05062 364 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 TIMP2P16035 220 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PUDPQ08623 228 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ZNF782Q6ZMW2 699 aaPredicted RBP19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SCMH1Q96GD3 660 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 BBS4Q96RK4 519 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CYSLTR2Q9NS75 346 aa19.18■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SLC36A2Q495M3 483 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ARHGAP15Q53QZ3 475 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FAM26DQ5JW98 314 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 GPR139Q6DWJ6 353 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SFXN4Q6P4A7 337 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ALG8Q9BVK2 526 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 C11orf49Q9H6J7 331 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 MRPL17Q9NRX2 175 aaKnown RBP19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CHURC1-FNTBB4DL54 471 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 M0R233 179 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CDC42EP2O14613 210 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SLC19A2O60779 497 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 WNT1P04628 370 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CTSLP07711 333 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FZD5Q13467 585 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 KHDRBS2Q5VWX1 349 aaKnown RBP19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CFAP77Q6ZQR2 320 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 COQ8AQ8NI60 647 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SPG21Q9NZD8 308 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FBXL4Q9UKA2 621 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ACAD8Q9UKU7 415 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 KIAA1671Q9BY89 1806 aa19.17■□□□□ 0.66
MAP1LC3B-206ENST00000564844 TRIM77I1YAP6 450 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FCMRO60667 390 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 EFCAB14O75071 495 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 IFNA7P01567 189 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 H2AFB2P0C5Z0 115 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ICAM2P13598 275 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PRLHRP49683 370 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ARHGDIBP52566 201 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 EPHB3P54753 998 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SIM1P81133 766 aaPredicted RBP19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SFRP5Q5T4F7 317 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 RNLSQ5VYX0 342 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 OVCA2Q8WZ82 227 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 NXPE2Q96DL1 559 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FAIM2Q9BWQ8 316 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 NANSQ9NR45 359 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 TM7SF3Q9NS93 570 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 HEATR5BQ9P2D3 2071 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 A0A1W2PPL8 197 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 TCRBV16S1A1N1A0A5B0 115 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PGRMC2O15173 223 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 POP7O75817 140 aaKnown RBP19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 RGS9O75916 674 aaPredicted RBP19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CTSAP10619 480 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 MAPK9P45984 424 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 GCGRP47871 477 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 KIAA1024LP59773 190 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 HSF2Q03933 536 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 DUSP2Q05923 314 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FAM83HQ6ZRV2 1179 aaPredicted RBP19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 NPAS4Q8IUM7 802 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 OR51L1Q8NGJ5 315 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 THAP4Q8WY91 577 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 COL26A1Q96A83 441 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 PRRC1Q96M27 445 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 BRD7Q9NPI1 651 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 DLL4Q9NR61 685 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 HCFC1R1Q9NWW0 138 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 KCMF1Q9P0J7 381 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ANAPC1Q9H1A4 1944 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 TEX51A0A1B0GUA7 166 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 DAPL1A0PJW8 107 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 OR5K3A6NET4 321 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 SERPINI2O75830 405 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 HK1P19367 917 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 FUT5Q11128 374 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 ALKAL2Q6UX46 152 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 Q6ZTK2 550 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 KCTD20Q7Z5Y7 419 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 OAFQ86UD1 273 aa19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 LRRC28Q86X40 367 aaPredicted RBP19.16■□□□□ 0.66
MAP1LC3B-206ENST00000564844 CBLCQ9ULV8 474 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms