RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 ANGPTL4Q9BY76 406 aa11.42□□□□□ -0.58
KARS-204ENST00000564578 CMTM6Q9NX76 183 aa11.42□□□□□ -0.58
KARS-204ENST00000564578 LIPT1Q9Y234 373 aa11.42□□□□□ -0.58
KARS-204ENST00000564578 NPIPA5A0A0B4J1W7 369 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 C2orf72A6NCS6 295 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 NPIPA7E9PJI5 369 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 PEX1O43933 1283 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 OXSR1O95747 527 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 P04436 131 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 GUSBP08236 651 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 NPIPA8P0DM63 369 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 TBXA2RP21731 343 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 EVI2BP34910 448 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 DNASE1L1P49184 302 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 ANXA11P50995 505 aaKnown RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 CHRNEQ04844 493 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 SNTA1Q13424 505 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 ART3Q13508 389 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 KLHL26Q53HC5 615 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 SOWAHCQ53LP3 525 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 RPUSD3Q6P087 351 aaKnown RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 C6orf89Q6UWU4 347 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 SERPINA11Q86U17 422 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 POGLUT1Q8NBL1 392 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 OR2M7Q8NG81 312 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 NSL1Q96IY1 281 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 ZNF583Q96ND8 569 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 HOPXQ9BPY8 73 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 RSPO3Q9BXY4 272 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 RAD21L1Q9H4I0 556 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 TMEM38AQ9H6F2 299 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 A4GALTQ9NPC4 353 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 UBQLN4Q9NRR5 601 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 P2RX2Q9UBL9 471 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 CORO2BQ9UQ03 480 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 KLF13Q9Y2Y9 288 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 RP1L1Q8IWN7 2480 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 CCT8L1PA6NM43 557 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 KIAA0513O60268 411 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 TRIM3O75382 744 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 UGT2B17O75795 530 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 UBOX5O94941 541 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 BCHEP06276 602 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 NGFRP08138 427 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 NR2F1P10589 423 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 ESRRAP11474 423 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 LCN1P31025 176 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 CPOXP36551 454 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 PMP22Q01453 160 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 GPR68Q15743 365 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 MAPK14Q16539 360 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 FLYWCH1Q4VC44 716 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 GPAT3Q53EU6 434 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 RNFT1Q5M7Z0 435 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 LRRC74BQ6ZQY2 392 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 NET1Q7Z628 596 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 CALHM3Q86XJ0 350 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 ZFP62Q8NB50 900 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 TMEM19Q96HH6 336 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 SH3GL1Q99961 368 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 TREX2Q9BQ50 279 aaPredicted RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 DOHHQ9BU89 302 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 QRSL1Q9H0R6 528 aaKnown RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 PIF1Q9H611 641 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 METTL7AQ9H8H3 244 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 THUMPD1Q9NXG2 353 aaKnown RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 GMPR2Q9P2T1 348 aaKnown RBP11.41□□□□□ -0.58
KARS-204ENST00000564578 USP22Q9UPT9 525 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 NTNG1Q9Y2I2 539 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 WDR45Q9Y484 360 aa11.41□□□□□ -0.58
KARS-204ENST00000564578 DSPPQ9NZW4 1301 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 PRAMEF25A6NGN4 478 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 ALG1L2C9J202 215 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 KLRC4-KLRK1H3BQV0 150 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 NME4O00746 187 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 HS6ST1O60243 411 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 WISP2O76076 250 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 PRB1P04280 392 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 ARAFP10398 606 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 ATP6V1C1P21283 382 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 DCTP40126 519 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 RFC3P40938 356 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 ATP12AP54707 1039 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 SLC25A3Q00325 362 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 GCNT6Q5T4J0 391 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 HMGN2P46Q86SG4 172 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 MARCH3Q86UD3 253 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 WDSUB1Q8N9V3 476 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 FAM173AQ9BQD7 235 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 POLE3Q9NRF9 147 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 ABCD2Q9UBJ2 740 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 ABCG2Q9UNQ0 655 aa11.4□□□□□ -0.58
KARS-204ENST00000564578 LRRC3CA6NJW4 275 aa11.39□□□□□ -0.59
KARS-204ENST00000564578 SLC28A2O43868 658 aa11.39□□□□□ -0.59
KARS-204ENST00000564578 GCM2O75603 506 aaPredicted RBP11.39□□□□□ -0.59
KARS-204ENST00000564578 C1QL1O75973 258 aa11.39□□□□□ -0.59
KARS-204ENST00000564578 SNX4O95219 450 aa11.39□□□□□ -0.59
KARS-204ENST00000564578 RASAL1O95294 804 aa11.39□□□□□ -0.59
KARS-204ENST00000564578 PGM3O95394 542 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms