RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ZNF589Q86UQ0 364 aaPredicted RBP2.94□□□□□ -1.94
UBR1-205ENST00000564540 CNTN4Q8IWV2 1026 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 DCAF4L2Q8NA75 395 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 ZBTB44Q8NCP5 570 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 FBXO30Q8TB52 745 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 COQ7Q99807 217 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 TEX13AQ9BXU3 409 aaPredicted RBP2.94□□□□□ -1.94
UBR1-205ENST00000564540 XPO4Q9C0E2 1151 aaKnown RBP2.94□□□□□ -1.94
UBR1-205ENST00000564540 PRMT8Q9NR22 394 aaPredicted RBP2.94□□□□□ -1.94
UBR1-205ENST00000564540 MARCH5Q9NX47 278 aa2.94□□□□□ -1.94
UBR1-205ENST00000564540 DHX29Q7Z478 1369 aaKnown RBP2.94□□□□□ -1.94
UBR1-205ENST00000564540 SAGE2PA6NJ88 616 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 ABCD4O14678 606 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 CD55P08174 381 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 ABHD2P08910 425 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 VDAC1P21796 283 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 ADORA2BP29275 332 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 SLC6A8P48029 635 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 DAZ2Q13117 558 aaKnown RBP2.93□□□□□ -1.94
UBR1-205ENST00000564540 DPYSL3Q14195 570 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 EBI3Q14213 229 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 TEX44Q53QW1 395 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 DNAJC21Q5F1R6 531 aaKnown RBP2.93□□□□□ -1.94
UBR1-205ENST00000564540 METTL11BQ5VVY1 283 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 SLC39A4Q6P5W5 647 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 BTNL3Q6UXE8 466 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 PPP1R27Q86WC6 154 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 CCDC71LQ8N9Z2 235 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 LEMD2Q8NC56 503 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 ANKRD49Q8WVL7 239 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 DCUN1D4Q92564 292 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 TBC1D31Q96DN5 1066 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 SMIM14Q96QK8 99 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 NAP1L3Q99457 506 aaPredicted RBP2.93□□□□□ -1.94
UBR1-205ENST00000564540 DAZ3Q9NR90 486 aaKnown RBP2.93□□□□□ -1.94
UBR1-205ENST00000564540 HOMER3Q9NSC5 361 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 KNSTRNQ9Y448 316 aa2.93□□□□□ -1.94
UBR1-205ENST00000564540 TUBAL3A6NHL2 446 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 USP27XA6NNY8 438 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 H0YL77 283 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 VEGFDO43915 354 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 KINO60870 393 aaKnown RBP2.92□□□□□ -1.94
UBR1-205ENST00000564540 ALOX5P09917 674 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 OR8U8P0C7N1 319 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 TOP1P11387 765 aaKnown RBP2.92□□□□□ -1.94
UBR1-205ENST00000564540 STMN1P16949 149 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 CCNA2P20248 432 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 STARP49675 285 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 HERVK_113P63132 956 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 ERVK-8P63133 956 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 ZNF154Q13106 437 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 LASP1Q14847 261 aaKnown RBP2.92□□□□□ -1.94
UBR1-205ENST00000564540 KARSQ15046 597 aaKnown RBP2.92□□□□□ -1.94
UBR1-205ENST00000564540 MPPED2Q15777 294 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 CYBRD1Q53TN4 286 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 STAC2Q6ZMT1 411 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 NET1Q7Z628 596 aaPredicted RBP2.92□□□□□ -1.94
UBR1-205ENST00000564540 ADAMTSL2Q86TH1 951 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 BPIFB2Q8N4F0 458 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 ALLCQ8N6M5 410 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 KRT35Q92764 455 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 MCHR2Q969V1 340 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 ADIPOR1Q96A54 375 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 FGGYQ96C11 551 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 ERVK-6Q9BXR3 956 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 NACA2Q9H009 215 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 DDX47Q9H0S4 455 aaKnown RBP2.92□□□□□ -1.94
UBR1-205ENST00000564540 CYP39A1Q9NYL5 469 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 OR1A1Q9P1Q5 309 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 SPRR3Q9UBC9 169 aa2.92□□□□□ -1.94
UBR1-205ENST00000564540 RLFQ13129 1914 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 LTBP1Q14766 1721 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 TTC26A0AVF1 554 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 ZSCAN5BA6NJL1 495 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 MAGEB4O15481 346 aaPredicted RBP2.91□□□□□ -1.94
UBR1-205ENST00000564540 ADAM12O43184 909 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 CABYRO75952 493 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 SUPT7LO94864 414 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 RPL29P47914 159 aaKnown RBP2.91□□□□□ -1.94
UBR1-205ENST00000564540 PPOXP50336 477 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 RPA4Q13156 261 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 EOGTQ5NDL2 527 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 FAM120AOSQ5T036 256 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 DCST2Q5T1A1 773 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 PAQR9Q6ZVX9 377 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 ZNF100Q8IYN0 542 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 ZNF619Q8N2I2 560 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 SPC24Q8NBT2 197 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 OR2A12Q8NGT7 310 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 CABS1Q96KC9 395 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 ACAT2Q9BWD1 397 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 FTHL17Q9BXU8 183 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 GDAP2Q9NXN4 497 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 LCMT1Q9UIC8 334 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 RAB26Q9ULW5 256 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 TDRKHQ9Y2W6 561 aaKnown RBP2.91□□□□□ -1.94
UBR1-205ENST00000564540 ABCC9O60706 1549 aa2.91□□□□□ -1.94
UBR1-205ENST00000564540 IGLV3-16A0A075B6K0 115 aa2.9□□□□□ -1.95
UBR1-205ENST00000564540 DDX39AO00148 427 aaKnown RBP2.9□□□□□ -1.95
UBR1-205ENST00000564540 ALOX15BO15296 676 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms