RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 AAGABQ6PD74 315 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 YRDCQ86U90 279 aaKnown RBP12.19□□□□□ -0.46
CLK3-216ENST00000564468 IFNEQ86WN2 208 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 ULK2Q8IYT8 1036 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 GLB1L3Q8NCI6 653 aaPredicted RBP12.19□□□□□ -0.46
CLK3-216ENST00000564468 OR10Q1Q8NGQ4 319 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 FAM110BQ8TC76 370 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 ACTRT2Q8TDY3 377 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 C16orf58Q96GQ5 468 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 MAELQ96JY0 434 aaKnown RBP12.19□□□□□ -0.46
CLK3-216ENST00000564468 C7orf26Q96N11 449 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 TIMP4Q99727 224 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 TTYH2Q9BSA4 534 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 YIPF4Q9BSR8 244 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 PRDM14Q9GZV8 571 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 AIG1Q9NVV5 245 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 TAS2R10Q9NYW0 307 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 TNFRSF10DQ9UBN6 386 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 SLC6A5Q9Y345 797 aa12.19□□□□□ -0.46
CLK3-216ENST00000564468 GOLGA8QA0A0J9YX86 632 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 GOLGA8OA6NCC3 632 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 GOLGA8NF8WBI6 632 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 SCDO00767 359 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 ANKRD28O15084 1053 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 TGDSO95455 350 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 IDO1P14902 403 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 BMP7P18075 431 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 TBXA2RP21731 343 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 DPP4P27487 766 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 PPP2R2AP63151 447 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 RCAN2Q14206 197 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 GSTA3Q16772 222 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
CLK3-216ENST00000564468 OR5M10Q6IEU7 315 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 NCCRP1Q6ZVX7 275 aaPredicted RBP12.18□□□□□ -0.46
CLK3-216ENST00000564468 MED12LQ86YW9 2145 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 MISPQ8IVT2 679 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 FADS6Q8N9I5 356 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 OR4A15Q8NGL6 344 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 FBXO30Q8TB52 745 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 NUDT8Q8WV74 236 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 UGT2B28Q9BY64 529 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 HOXD1Q9GZZ0 328 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 WDR55Q9H6Y2 383 aaPredicted RBP12.18□□□□□ -0.46
CLK3-216ENST00000564468 UBQLN4Q9NRR5 601 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 INTS9Q9NV88 658 aaKnown RBP12.18□□□□□ -0.46
CLK3-216ENST00000564468 FBXL2Q9UKC9 423 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 CAMK2AQ9UQM7 478 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 RNF6Q9Y252 685 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 FAM215AQ9Y5M1 114 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 APCP25054 2843 aa12.18□□□□□ -0.46
CLK3-216ENST00000564468 RNF103-CHMP3A0A140T963 221 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 ALG1L2C9J202 215 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 LINC01387J3KSC0 135 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 NDUFB5O43674 189 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 OXSR1O95747 527 aaPredicted RBP12.17□□□□□ -0.46
CLK3-216ENST00000564468 ANGPTL1O95841 491 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 EPPINO95925 133 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 AGR2O95994 175 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 AK1P00568 194 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 IGKV1D-16P01601 117 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 ALDOCP09972 364 aaKnown RBP12.17□□□□□ -0.46
CLK3-216ENST00000564468 GLI4P10075 376 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 CPN1P15169 458 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 POU3F2P20265 443 aaPredicted RBP12.17□□□□□ -0.46
CLK3-216ENST00000564468 MATN1P21941 496 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 UQCRC2P22695 453 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 CHMP24386 653 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 MSX1P28360 303 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 ZFP36L2P47974 494 aaKnown RBP12.17□□□□□ -0.46
CLK3-216ENST00000564468 WNT3P56703 355 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 STX5Q13190 355 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 GRAMD1BQ3KR37 738 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 FAM174BQ3ZCQ3 159 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 GLYR1Q49A26 553 aaPredicted RBP12.17□□□□□ -0.46
CLK3-216ENST00000564468 SPANXN4Q5MJ08 99 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 RIPPLY2Q5TAB7 128 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 FIGNL1Q6PIW4 674 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 C6orf120Q7Z4R8 191 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 MARCH3Q86UD3 253 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 LACC1Q8IV20 430 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 MARVELD2Q8N4S9 558 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 TRIML2Q8N7C3 387 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 ZNF527Q8NB42 609 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 OR2M3Q8NG83 312 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 OR5AK3PQ8NH89 298 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 LILRB4Q8NHJ6 448 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 GOT1L1Q8NHS2 421 aaPredicted RBP12.17□□□□□ -0.46
CLK3-216ENST00000564468 DUSP19Q8WTR2 217 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 CDS1Q92903 461 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 SLC35G5Q96KT7 338 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 SFXN2Q96NB2 322 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 DSN1Q9H410 356 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 EXD2Q9NVH0 621 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 GPATCH2Q9NW75 528 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 STOML1Q9UBI4 398 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 BTNL2Q9UIR0 455 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 GPR45Q9Y5Y3 372 aa12.17□□□□□ -0.46
CLK3-216ENST00000564468 USH1CQ9Y6N9 552 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms