RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 RPA2P15927 270 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 BMP8BP34820 402 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 GGT5P36269 586 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SLC26A5P58743 744 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TMEM115Q12893 351 aaPredicted RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 EML3Q32P44 896 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 OR4F3Q6IEY1 312 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 OR2T2Q6IF00 324 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 BMP8AQ7Z5Y6 402 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 FAM71E2Q8N5Q1 922 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ZMIZ2Q8NF64 920 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 OR51G2Q8NGK0 314 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ADIPOR1Q96A54 375 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 RNF170Q96K19 258 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SLC32A1Q9H598 525 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 EVA1AQ9H8M9 152 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 WASF3Q9UPY6 502 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 RCE1Q9Y256 329 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 STYXL1Q9Y6J8 313 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ZNF780BQ9Y6R6 833 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 AGPAT2O15120 278 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 JTBO76095 146 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 IGSF6O95976 241 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 THP07101 528 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 PRF1P14222 555 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 UQCRC2P22695 453 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 EVX1P49640 407 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 CCR6P51684 374 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SELENOWP63302 87 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 MGAT3Q09327 533 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SEZ6Q53EL9 994 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 RNF44Q7L0R7 432 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 CNTN4Q8IWV2 1026 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 DTD1Q8TEA8 209 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ZNF384Q8TF68 577 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 GLYATL2Q8WU03 294 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 CMSS1Q9BQ75 279 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 TSPAN11A1L157 253 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ZNF208O43345 1280 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ALDOCP09972 364 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 FPR3P25089 353 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ABCD3P28288 659 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 CCKARP32238 428 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 NUP54Q7Z3B4 507 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TRMT11Q7Z4G4 463 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 IL31RAQ8NI17 732 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ACO2Q99798 780 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 TAS2R16Q9NYV7 291 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 LRP6O75581 1613 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 CPSF4LA6NMK7 179 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 CD3GP09693 182 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 CPEP16870 476 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ITPKAP23677 461 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 NFYBP25208 207 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 TAGLN2P37802 199 aaKnown RBP5.93□□□□□ -1.46
CLK3-212ENST00000563418 SLC7A9P82251 487 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 MAP2K5Q13163 448 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 SFXN4Q6P4A7 337 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 ADAMTS15Q8TE58 950 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 CERS4Q9HA82 394 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 FBXL21Q9UKT6 434 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 PEAK1Q9H792 1746 aa5.93□□□□□ -1.46
CLK3-212ENST00000563418 A8MXE2 369 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 SMAD6O43541 496 aaKnown RBP5.92□□□□□ -1.46
CLK3-212ENST00000563418 CIDEAO60543 219 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 SFTA3P0C7M3 94 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 LAP3P28838 519 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 CRABP1P29762 137 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 SDHAP31040 664 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 SLC6A6P31641 620 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 PTTG1IPP53801 180 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 OR12D2P58182 307 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 TRILQ7L0X0 811 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 SLC29A4Q7RTT9 530 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 OR7D4Q8NG98 312 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 OR5B17Q8NGF7 314 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 BRI3BPQ8WY22 251 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 EDAQ92838 391 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 ZNF582Q96NG8 517 aaPredicted RBP5.92□□□□□ -1.46
CLK3-212ENST00000563418 KCNA7Q96RP8 456 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 ALG8Q9BVK2 526 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 UCK1Q9HA47 277 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 PLEKHA1Q9HB21 404 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 METTL1Q9UBP6 276 aaKnown RBP5.92□□□□□ -1.46
CLK3-212ENST00000563418 M0R129 80 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 HLA-HP01893 362 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 BDH1Q02338 343 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 IRF5Q13568 498 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 LIPIQ6XZB0 460 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 ZDHHC14Q8IZN3 488 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 ZNF709Q8N972 641 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 FBXO32Q969P5 355 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 MEGF10Q96KG7 1140 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 AP5M1Q9H0R1 490 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 TMEM14AQ9Y6G1 99 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 URADA6NGE7 173 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 H7BY64 318 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 PHOX2AO14813 284 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 GALP22466 123 aa5.92□□□□□ -1.46
CLK3-212ENST00000563418 CBFBQ13951 182 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms