RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 PLA2G4CQ9UP65 541 aa4.29□□□□□ -1.72
LINC00254-201ENST00000563416 MRPS28Q9Y2Q9 187 aaKnown RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 GOLGA4Q13439 2230 aaKnown RBP4.29□□□□□ -1.72
LINC00254-201ENST00000563416 COL27A1Q8IZC6 1860 aaPredicted RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 A0A0D9SEW6 157 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 TRBV2A0A0J9YWF9 115 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 RGSL1A5PLK6 1076 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 MCF2LO15068 1137 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ALOX15BO15296 676 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 TTI1O43156 1089 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 SNAP91O60641 907 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 RNASEH1O60930 286 aaKnown RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ZNF821O75541 412 aaPredicted RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 PROSCO94903 275 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 CD160O95971 181 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 C9P02748 559 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 HEXBP07686 556 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 RETP07949 1114 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 H2AFZP0C0S5 128 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 OR2T7P0C7T2 308 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 FRMD6-AS1P0C7T7 363 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ZNF883P0CG24 379 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 SPP1P10451 314 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ZNF26P17031 533 aaPredicted RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 SLC9A3P48764 834 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 HCAR3P49019 387 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 SERPINH1P50454 418 aaKnown RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 TPMTP51580 245 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ATXN3P54252 364 aaPredicted RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 HADHBP55084 474 aaKnown RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 TPI1P60174 286 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 RPS14P62263 151 aaKnown RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 DLK1P80370 383 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 GNA12Q03113 381 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 TNK1Q13470 666 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 DPYSQ14117 519 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ELAVL3Q14576 367 aaKnown RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 INAQ16352 499 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 SGCBQ16585 318 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 PARP15Q460N3 678 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 IFI44LQ53G44 452 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ZNF776Q68DI1 518 aaPredicted RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 SCYL2Q6P3W7 929 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 H2AFVQ71UI9 128 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 TMEM139Q8IV31 216 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 FAM219AQ8IW50 185 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 UMODL1-AS1Q8N2C9 162 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ZNF564Q8TBZ8 553 aaPredicted RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 MRGPRDQ8TDS7 321 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 CCDC107Q8WV48 283 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 RLN3Q8WXF3 142 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 CTNNBL1Q8WYA6 563 aaPredicted RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 PRCCQ92733 491 aaPredicted RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 RIT1Q92963 219 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 TRIM44Q96DX7 344 aaPredicted RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 CCDC42Q96M95 316 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 PANX2Q96RD6 677 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ANP32EQ9BTT0 268 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ARRDC1-AS1Q9H2J1 176 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 DHX35Q9H5Z1 703 aaKnown RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 LRRC19Q9H756 370 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 SRD5A3Q9H8P0 318 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 LIN28AQ9H9Z2 209 aaKnown RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ZNF71Q9NQZ8 489 aaPredicted RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 POLE3Q9NRF9 147 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 PNPLA3Q9NST1 481 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 DNAJC11Q9NVH1 559 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 GPATCH2LQ9NWQ4 482 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 RCOR3Q9P2K3 495 aaPredicted RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 TBK1Q9UHD2 729 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 GMEB2Q9UKD1 530 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 RAB23Q9ULC3 237 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 SCML1Q9UN30 329 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 AURKCQ9UQB9 309 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 ITM2BQ9Y287 266 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 TDRKHQ9Y2W6 561 aaKnown RBP4.28□□□□□ -1.72
LINC00254-201ENST00000563416 IKBKGQ9Y6K9 419 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 SPEGQ15772 3267 aa4.28□□□□□ -1.72
LINC00254-201ENST00000563416 IGHV4-4A0A075B6R2 117 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 LOC101059948A0A1B0GTJ6 334 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 BCLAF3A2AJT9 711 aaKnown RBP4.27□□□□□ -1.73
LINC00254-201ENST00000563416 MEIOCA2RUB1 952 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 ZSCAN5CA6NGD5 496 aaPredicted RBP4.27□□□□□ -1.73
LINC00254-201ENST00000563416 TRIM64CA6NLI5 447 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 K7ERQ8 282 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 EEF2KO00418 725 aaKnown RBP4.27□□□□□ -1.73
LINC00254-201ENST00000563416 ARHGEF9O43307 516 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 KDELR3O43731 214 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 FCGR3BO75015 233 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 RHOBTB1O94844 696 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 AP2A2O94973 939 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 NGFP01138 241 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 CTSLP07711 333 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 ABHD2P08910 425 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 GOT1P17174 413 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 CCNA2P20248 432 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 CD22P20273 847 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 CA6P23280 308 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 IL4RP24394 825 aa4.27□□□□□ -1.73
LINC00254-201ENST00000563416 OXTRP30559 389 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms