RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ABT1Q9ULW3 272 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 ENTPD4Q9Y227 616 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 SYT5O00445 386 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 MAN2B1O00754 1011 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 VEGFDO43915 354 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 RPN2P04844 631 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 HMGN1P05114 100 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 LAG3P18627 525 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 COL9A2Q14055 689 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 ZNF620Q6ZNG0 422 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 OAFQ86UD1 273 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 OR56A1Q8NGH5 318 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 OR8K5Q8NH50 307 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 OR5K2Q8NHB8 316 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 LRRC20Q8TCA0 184 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 TMEM255BQ8WV15 326 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 MCHR1Q99705 422 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 SMAD5Q99717 465 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 ARHGDIGQ99819 225 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 PCBD2Q9H0N5 130 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 SLC38A1Q9H2H9 487 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 KLHL31Q9H511 634 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 MED20Q9H944 212 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 TM7SF3Q9NS93 570 aa13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 ELF5Q9UKW6 265 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-202ENST00000561976 NUP210Q8TEM1 1887 aaPredicted RBP13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 LOC105369274A0A096LPK9 316 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 TEX13CA0A0J9YWL9 993 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 DAPL1A0PJW8 107 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 SHOXO15266 292 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 NDUFV2P19404 249 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 GALP22466 123 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 RFX3P48380 749 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 SLC16A1P53985 500 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 TRA2BP62995 288 aaKnown RBP13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 PRR5P85299 388 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 DBPQ10586 325 aaPredicted RBP13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 ARHGAP19Q14CB8 494 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 KLHL12Q53G59 568 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 TMEM64Q6YI46 380 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 OR4N4Q8N0Y3 316 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 OR6C4Q8NGE1 309 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 TRMT10AQ8TBZ6 339 aaKnown RBP13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 CD99L2Q8TCZ2 262 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 ABHD1Q96SE0 405 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 OR51J1Q9H342 316 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 GHITMQ9H3K2 345 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 EMC7Q9NPA0 242 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 ZFP64Q9NPA5 681 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 UCKL1Q9NWZ5 548 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 KCNN3Q9UGI6 736 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 PRKAG2Q9UGJ0 569 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 MRPS7Q9Y2R9 242 aaKnown RBP13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 A0A1W2PS29 197 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 PRNPP04156 253 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 M6PRP20645 277 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 F8A1P23610 371 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 HOXD10P28358 340 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 CSNK1G2P78368 415 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 DUSP2Q05923 314 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 SLC3A1Q07837 685 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 FZD5Q13467 585 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 DECR1Q16698 335 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 SFXN4Q6P4A7 337 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 LYPD4Q6UWN0 246 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 TMEM99Q8N816 258 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 OR10H4Q8NGA5 316 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 OR5W2Q8NH69 310 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 ARRDC3Q96B67 414 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 CNRIP1Q96F85 164 aaPredicted RBP13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 SCMH1Q96GD3 660 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 SLC41A3Q96GZ6 507 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 CCDC120Q96HB5 630 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 TRIM36Q9NQ86 728 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 MARK1Q9P0L2 795 aa13.05□□□□□ -0.32
VPS9D1-202ENST00000561976 LRIT2A6NDA9 550 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 B8ZZF3 427 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 I3L521 148 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 ERI3O43414 337 aaKnown RBP13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 RAF1P04049 648 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 PDGFAP04085 211 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 TCRBP04435 133 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 BTCP35070 178 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 HSD17B2P37059 387 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 MC3RP41968 323 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 STXBP1P61764 594 aaKnown RBP13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 RPS7P62081 194 aaKnown RBP13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 ARHGAP15Q53QZ3 475 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 IDO2Q6ZQW0 420 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 GDF7Q7Z4P5 450 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 CEACAM19Q7Z692 300 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 KIAA0907Q7Z7F0 614 aaPredicted RBP13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 FAM20CQ8IXL6 584 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 TOMM5Q8N4H5 51 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 C7orf57Q8NEG2 295 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 NUP43Q8NFH3 380 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 OR11H4Q8NGC9 324 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 SFXN5Q8TD22 340 aa13.04□□□□□ -0.32
VPS9D1-202ENST00000561976 KCTD12Q96CX2 325 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms