RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 NUP43Q8NFH3 380 aa22.86■■□□□ 1.25
NME3-202ENST00000561637 GPR151Q8TDV0 419 aa22.86■■□□□ 1.25
NME3-202ENST00000561637 DUSP19Q8WTR2 217 aa22.86■■□□□ 1.25
NME3-202ENST00000561637 HOXB13Q92826 284 aaPredicted RBP22.86■■□□□ 1.25
NME3-202ENST00000561637 KLHDC3Q9BQ90 382 aa22.86■■□□□ 1.25
NME3-202ENST00000561637 SIRT3Q9NTG7 399 aaPredicted RBP22.86■■□□□ 1.25
NME3-202ENST00000561637 FAM120CQ9NX05 1096 aaKnown RBP22.86■■□□□ 1.25
NME3-202ENST00000561637 ZNF629Q9UEG4 869 aaPredicted RBP22.86■■□□□ 1.25
NME3-202ENST00000561637 FN1P02751 2386 aaKnown RBP22.85■■□□□ 1.25
NME3-202ENST00000561637 NKX2-2O95096 273 aa22.85■■□□□ 1.25
NME3-202ENST00000561637 HK1P19367 917 aa22.85■■□□□ 1.25
NME3-202ENST00000561637 MANFP55145 182 aaKnown RBP22.85■■□□□ 1.25
NME3-202ENST00000561637 PTGR1Q14914 329 aa22.85■■□□□ 1.25
NME3-202ENST00000561637 FBXL19-AS1Q494R0 122 aa22.85■■□□□ 1.25
NME3-202ENST00000561637 BIVMQ86UB2 503 aa22.85■■□□□ 1.25
NME3-202ENST00000561637 UBQLNLQ8IYU4 475 aa22.85■■□□□ 1.25
NME3-202ENST00000561637 KRTCAP2Q8N6L1 136 aa22.85■■□□□ 1.25
NME3-202ENST00000561637 SLC16A11Q8NCK7 471 aa22.85■■□□□ 1.25
NME3-202ENST00000561637 SLC9A6Q92581 669 aa22.85■■□□□ 1.25
NME3-202ENST00000561637 INTS12Q96CB8 462 aaKnown RBP22.85■■□□□ 1.25
NME3-202ENST00000561637 ABCG2Q9UNQ0 655 aa22.85■■□□□ 1.25
NME3-202ENST00000561637 TMED5Q9Y3A6 229 aa22.85■■□□□ 1.25
NME3-202ENST00000561637 NUP214P35658 2090 aaPredicted RBP22.85■■□□□ 1.25
NME3-202ENST00000561637 WDR91A4D1P6 747 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 SCAMP2O15127 329 aaKnown RBP22.84■■□□□ 1.25
NME3-202ENST00000561637 ITM2AO43736 263 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 LAMP1P11279 417 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 DSCR4P56555 118 aaPredicted RBP22.84■■□□□ 1.25
NME3-202ENST00000561637 DUSP5Q16690 384 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 KRT71Q3SY84 523 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 RAET1LQ5VY80 246 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 AAGABQ6PD74 315 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 FIGNL1Q6PIW4 674 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 GATSQ8NAP1 163 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 ZFP28Q8NHY6 868 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 MBD6Q96DN6 1003 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 ZBED6CLQ96FA7 236 aaPredicted RBP22.84■■□□□ 1.25
NME3-202ENST00000561637 TMEM109Q9BVC6 243 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 PARD6BQ9BYG5 372 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 EML4Q9HC35 981 aaKnown RBP22.84■■□□□ 1.25
NME3-202ENST00000561637 NTMQ9P121 344 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 ATP6V1HQ9UI12 483 aa22.84■■□□□ 1.25
NME3-202ENST00000561637 MRPS18CQ9Y3D5 142 aaKnown RBP22.84■■□□□ 1.25
NME3-202ENST00000561637 IFI6P09912 130 aa22.83■■□□□ 1.25
NME3-202ENST00000561637 CHMP24386 653 aa22.83■■□□□ 1.25
NME3-202ENST00000561637 SUCLG1P53597 346 aaKnown RBP22.83■■□□□ 1.25
NME3-202ENST00000561637 SF3B4Q15427 424 aaKnown RBP eCLIP22.83■■□□□ 1.252e-10■■■■■ 29.7
NME3-202ENST00000561637 C6orf136Q5SQH8 315 aa22.83■■□□□ 1.25
NME3-202ENST00000561637 CCNJQ5T5M9 372 aa22.83■■□□□ 1.25
NME3-202ENST00000561637 MFSD12Q6NUT3 480 aa22.83■■□□□ 1.25
NME3-202ENST00000561637 MREGQ8N565 214 aa22.83■■□□□ 1.25
NME3-202ENST00000561637 NPAS1Q99742 590 aa22.83■■□□□ 1.25
NME3-202ENST00000561637 ACSS1Q9NUB1 689 aaPredicted RBP22.83■■□□□ 1.25
NME3-202ENST00000561637 JKAMPQ9P055 326 aa22.83■■□□□ 1.25
NME3-202ENST00000561637 ZNF337Q9Y3M9 751 aa22.83■■□□□ 1.25
NME3-202ENST00000561637 OR2M5A3KFT3 312 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 ANGPTL1O95841 491 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 ASMTP46597 345 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 RNF144AP50876 292 aaPredicted RBP22.82■■□□□ 1.24
NME3-202ENST00000561637 EXOSC6Q5RKV6 272 aaKnown RBP22.82■■□□□ 1.24
NME3-202ENST00000561637 IL23RQ5VWK5 629 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 LUZP2Q86TE4 346 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 OR4C3Q8NH37 302 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 GOT1L1Q8NHS2 421 aaPredicted RBP22.82■■□□□ 1.24
NME3-202ENST00000561637 LINC01560Q8TB33 94 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 WNT2BQ93097 391 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 FAM120BQ96EK7 910 aaKnown RBP22.82■■□□□ 1.24
NME3-202ENST00000561637 C1GALT1C1Q96EU7 318 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 PPP3R2Q96LZ3 170 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 MS4A4EQ96PG1 132 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 MDFIQ99750 246 aa22.82■■□□□ 1.24
NME3-202ENST00000561637 A6NNC1 897 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 SEC14L5O43304 696 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 EMC8O43402 210 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 HCRTR2O43614 444 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 RCBTB2O95199 551 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 KCNH1O95259 989 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 OPRM1P35372 400 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 HPCAL1P37235 193 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 SERPINB4P48594 390 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 CLDN20P56880 219 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 FLYWCH1Q4VC44 716 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 GRAMD2AQ8IUY3 354 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 CDRT4Q8N9R6 151 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 FIG4Q92562 907 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 PPP1R36Q96LQ0 422 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 UCN2Q96RP3 112 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 TBL1XR1Q9BZK7 514 aa22.81■■□□□ 1.24
NME3-202ENST00000561637 JMJD1CQ15652 2540 aa22.8■■□□□ 1.24
NME3-202ENST00000561637 KCNK2O95069 426 aa22.8■■□□□ 1.24
NME3-202ENST00000561637 OXSR1O95747 527 aaPredicted RBP22.8■■□□□ 1.24
NME3-202ENST00000561637 IL18BPO95998 194 aa22.8■■□□□ 1.24
NME3-202ENST00000561637 MPP2Q14168 576 aa22.8■■□□□ 1.24
NME3-202ENST00000561637 ATP6AP1LQ52LC2 224 aa22.8■■□□□ 1.24
NME3-202ENST00000561637 PAMR1Q6UXH9 720 aa22.8■■□□□ 1.24
NME3-202ENST00000561637 CAMKMTQ7Z624 323 aa22.8■■□□□ 1.24
NME3-202ENST00000561637 NUDCD3Q8IVD9 361 aa22.8■■□□□ 1.24
NME3-202ENST00000561637 FNDC5Q8NAU1 212 aa22.8■■□□□ 1.24
NME3-202ENST00000561637 CEP70Q8NHQ1 597 aa22.8■■□□□ 1.24
NME3-202ENST00000561637 FAM110BQ8TC76 370 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms