RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 GALNT10Q86SR1 603 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 EXOC3L1Q86VI1 746 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 ZNF610Q8N9Z0 462 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 PIK3R3Q92569 461 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 GFM2Q969S9 779 aaKnown RBP10.47□□□□□ -0.73
USP3-220ENST00000561381 CIDECQ96AQ7 238 aaPredicted RBP10.47□□□□□ -0.73
USP3-220ENST00000561381 NPAS1Q99742 590 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 RHOXF2Q9BQY4 288 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 PIGQQ9BRB3 760 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 LMF2Q9BU23 707 aaKnown RBP10.47□□□□□ -0.73
USP3-220ENST00000561381 RNF122Q9H9V4 155 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 SDHAF3Q9NRP4 125 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 BEX4Q9NWD9 120 aaPredicted RBP10.47□□□□□ -0.73
USP3-220ENST00000561381 DCDC2Q9UHG0 476 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 GRID1Q9ULK0 1009 aa10.47□□□□□ -0.73
USP3-220ENST00000561381 EMC8O43402 210 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 PLIN3O60664 434 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 GLRA3O75311 464 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 CRCPO75575 148 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 RSL1D1O76021 490 aaKnown RBP10.46□□□□□ -0.73
USP3-220ENST00000561381 ANGPTL1O95841 491 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 SHBGP04278 402 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 POU2F1P14859 743 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 SLC6A8P48029 635 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 LTBQ06643 244 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 GANABQ14697 944 aaKnown RBP10.46□□□□□ -0.73
USP3-220ENST00000561381 GUSBP1Q15486 140 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 ZNHIT3Q15649 155 aaPredicted RBP10.46□□□□□ -0.73
USP3-220ENST00000561381 ZNF385BQ569K4 471 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 ANKRD34AQ69YU3 496 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 ZAR1Q86SH2 424 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 IFT20Q8IY31 132 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 FAM76AQ8TAV0 307 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 SLC9A6Q92581 669 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 CCDC126Q96EE4 140 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 PIK3IP1Q96FE7 263 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 ZC3HAV1LQ96H79 300 aaKnown RBP10.46□□□□□ -0.73
USP3-220ENST00000561381 C18orf12Q96KH6 178 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 KLHDC3Q9BQ90 382 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 MED18Q9BUE0 208 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 TBL1XR1Q9BZK7 514 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 PTGES2Q9H7Z7 377 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 RRAGDQ9NQL2 400 aaPredicted RBP10.46□□□□□ -0.73
USP3-220ENST00000561381 VDAC3Q9Y277 283 aa10.46□□□□□ -0.73
USP3-220ENST00000561381 NIPBLQ6KC79 2804 aaeCLIP10.45□□□□□ -0.74
USP3-220ENST00000561381 PRR14LQ5THK1 2151 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 IGLV3-32A0A0A0MS00 114 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 C16orf97H3BN30 126 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 AKAP10O43572 662 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 SEC22BO75396 215 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 SLITRK5O94991 958 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 OPN1LWP04000 364 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 INHBBP09529 407 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 EFNA1P20827 205 aaPredicted RBP10.45□□□□□ -0.74
USP3-220ENST00000561381 CRYGSP22914 178 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 LOXP28300 417 aaPredicted RBP10.45□□□□□ -0.74
USP3-220ENST00000561381 ADSLP30566 484 aaPredicted RBP10.45□□□□□ -0.74
USP3-220ENST00000561381 MAP3K8P41279 467 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 KCNJ5P48544 419 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 PRKAG1P54619 331 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 EEFSECP57772 596 aaKnown RBP10.45□□□□□ -0.74
USP3-220ENST00000561381 DNAJB13P59910 316 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 PRR5P85299 388 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 TMEM44Q2T9K0 475 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 CFAP157Q5JU67 520 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 SHEQ5VZ18 495 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 IKBIPQ70UQ0 350 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 BIVMQ86UB2 503 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 GGNQ86UU5 652 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 CIARTQ8N365 385 aaPredicted RBP10.45□□□□□ -0.74
USP3-220ENST00000561381 METTL25Q8N6Q8 603 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 GATSQ8NAP1 163 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 LRRN4CLQ8ND94 238 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 OR2T11Q8NH01 316 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 OR4C3Q8NH37 302 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 CLHC1Q8NHS4 586 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 FBXO30Q8TB52 745 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 GPR151Q8TDV0 419 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 MARK4Q96L34 752 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 UBTD1Q9HAC8 227 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 ELOVL5Q9NYP7 299 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 MRTO4Q9UKD2 239 aaKnown RBP10.45□□□□□ -0.74
USP3-220ENST00000561381 CLEC4AQ9UMR7 237 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 FIS1Q9Y3D6 152 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 ZNF175Q9Y473 711 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 AP4B1Q9Y6B7 739 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 HEATR5AQ86XA9 2040 aa10.45□□□□□ -0.74
USP3-220ENST00000561381 ROS1P08922 2347 aa10.44□□□□□ -0.74
USP3-220ENST00000561381 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.44□□□□□ -0.74
USP3-220ENST00000561381 SMIM23A6NLE4 172 aa10.44□□□□□ -0.74
USP3-220ENST00000561381 NPIPB8E9PQR5 432 aa10.44□□□□□ -0.74
USP3-220ENST00000561381 LINC01387J3KSC0 135 aa10.44□□□□□ -0.74
USP3-220ENST00000561381 PDPK1O15530 556 aa10.44□□□□□ -0.74
USP3-220ENST00000561381 KCNH1O95259 989 aa10.44□□□□□ -0.74
USP3-220ENST00000561381 OXSR1O95747 527 aaPredicted RBP10.44□□□□□ -0.74
USP3-220ENST00000561381 UROSP10746 265 aa10.44□□□□□ -0.74
USP3-220ENST00000561381 CD8BP10966 210 aa10.44□□□□□ -0.74
USP3-220ENST00000561381 ACP2P11117 423 aa10.44□□□□□ -0.74
USP3-220ENST00000561381 PRPS2P11908 318 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms