RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SIRT5Q9NXA8 310 aa10.63□□□□□ -0.71
CARMIL3-204ENST00000561354 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.63□□□□□ -0.71
CARMIL3-204ENST00000561354 SENP1Q9P0U3 644 aa10.63□□□□□ -0.71
CARMIL3-204ENST00000561354 HEATR5AQ86XA9 2040 aa10.63□□□□□ -0.71
CARMIL3-204ENST00000561354 CSPG4Q6UVK1 2322 aa10.63□□□□□ -0.71
CARMIL3-204ENST00000561354 IGLV3-32A0A0A0MS00 114 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 MYO1GB0I1T2 1018 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 KLF4O43474 513 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 SHOX2O60902 331 aaPredicted RBP10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 AQP8O94778 261 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 SUPT7LO94864 414 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 THBDP07204 575 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 ABHD2P08910 425 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 IL11P20809 199 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 TIA1P31483 386 aaKnown RBP eCLIP10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 NR1H2P55055 460 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 DMTNQ08495 405 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 ACSM2AQ08AH3 577 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 ZNF155Q12901 538 aaPredicted RBP10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 STX5Q13190 355 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 SGCBQ16585 318 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 DECR1Q16698 335 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 TMEM44Q2T9K0 475 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 KRT71Q3SY84 523 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 UNC50Q53HI1 259 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 UBAP2Q5T6F2 1119 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 FAM219BQ5XKK7 198 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 ACSM2BQ68CK6 577 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 ANKRD34AQ69YU3 496 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 ZNF704Q6ZNC4 412 aaPredicted RBP10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 CXXC5Q7LFL8 322 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 OR5M1Q8NGP8 315 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 OR6K3Q8NGY3 331 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 METTL6Q8TCB7 284 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 TMEM171Q8WVE6 324 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 APIPQ96GX9 242 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 BBS4Q96RK4 519 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 PAFAH2Q99487 392 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 RTN4RQ9BZR6 473 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 CXorf56Q9H5V9 222 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 TAS2R7Q9NYW3 318 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 FLRT3Q9NZU0 649 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 STOML1Q9UBI4 398 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 ZNF180Q9UJW8 692 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 MRTO4Q9UKD2 239 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 GRID1Q9ULK0 1009 aa10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 C19orf53Q9UNZ5 99 aaPredicted RBP10.62□□□□□ -0.71
CARMIL3-204ENST00000561354 SERTM1A2A2V5 107 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 PSMG1O95456 288 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 IL33O95760 270 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 TAC1P20366 129 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 DDCP20711 480 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 HMOX2P30519 316 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 PSMD4P55036 377 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 C17orf67Q0P5P2 114 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 CAPRIN1Q14444 709 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 SH2D4BQ5SQS7 431 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 ZNF678Q5SXM1 525 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 GPRIN3Q6ZVF9 776 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 ZNF771Q7L3S4 317 aaPredicted RBP10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 MARCH3Q86UD3 253 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 GGNQ86UU5 652 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 OR2L13Q8N349 312 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 RIBC1Q8N443 379 aaPredicted RBP10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 ZNF611Q8N823 705 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 ARL8AQ96BM9 186 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 GMPPAQ96IJ6 420 aaPredicted RBP10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 TMEM204Q9BSN7 226 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 LMF2Q9BU23 707 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 OR10A4Q9H209 315 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 CDC42EP4Q9H3Q1 356 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 Q9N2J8 555 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 FANCFQ9NPI8 374 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 PAQR5Q9NXK6 330 aaPredicted RBP10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 STK38LQ9Y2H1 464 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 EMC9Q9Y3B6 208 aa10.61□□□□□ -0.71
CARMIL3-204ENST00000561354 TLN2Q9Y4G6 2542 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 PCNX3Q9H6A9 2034 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 TTC36A6NLP5 189 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 TRIM49D1C9J1S8 452 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 UPK1AO00322 258 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 HS3ST1O14792 307 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 SS18L1O75177 396 aaPredicted RBP10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 CRLF1O75462 422 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 SOX30O94993 753 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 JUNP05412 331 aaKnown RBP10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 ENO1P06733 434 aaKnown RBP10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 ANXA4P09525 319 aaPredicted RBP10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 IFI6P09912 130 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 ZNF17P17021 662 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 IMPDH1P20839 514 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 HTR6P50406 440 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 NCBP2P52298 156 aaKnown RBP eCLIP10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 ATP5J2P56134 94 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 PRR5P85299 388 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 ZNF763Q0D2J5 394 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 C2orf80Q0P641 193 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 SLC29A2Q14542 456 aa10.6□□□□□ -0.71
CARMIL3-204ENST00000561354 ZNHIT3Q15649 155 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms