RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 RFTN2Q52LD8 501 aaPredicted RBP6.7□□□□□ -1.34
ZEB1-223ENST00000561304 ARSKQ6UWY0 536 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 APOOLQ6UXV4 268 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 RNF165Q6ZSG1 346 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 IKBIPQ70UQ0 350 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 ZAR1Q86SH2 424 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 GALNT10Q86SR1 603 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 TMEM200AQ86VY9 491 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 IFNEQ86WN2 208 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 TRIM42Q8IWZ5 723 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 PM20D2Q8IYS1 436 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 SAMD14Q8IZD0 417 aaPredicted RBP6.7□□□□□ -1.34
ZEB1-223ENST00000561304 FADS6Q8N9I5 356 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 OR2M3Q8NG83 312 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 OR5M1Q8NGP8 315 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 FAM76AQ8TAV0 307 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 FBXO30Q8TB52 745 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 AGR3Q8TD06 166 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 TWIST2Q8WVJ9 160 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 PIK3R3Q92569 461 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 ZBTB9Q96C00 473 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 TMCO6Q96DC7 493 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 GIMAP5Q96F15 307 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 OTUB1Q96FW1 271 aaPredicted RBP6.7□□□□□ -1.34
ZEB1-223ENST00000561304 C3orf30Q96M34 536 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 KLHDC3Q9BQ90 382 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 ZNF559Q9BR84 538 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 GPATCH1Q9BRR8 931 aaKnown RBP6.7□□□□□ -1.34
ZEB1-223ENST00000561304 LMF2Q9BU23 707 aaKnown RBP6.7□□□□□ -1.34
ZEB1-223ENST00000561304 STMN4Q9H169 189 aaPredicted RBP6.7□□□□□ -1.34
ZEB1-223ENST00000561304 EQTNQ9NQ60 294 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 RRAGDQ9NQL2 400 aaPredicted RBP6.7□□□□□ -1.34
ZEB1-223ENST00000561304 DDX18Q9NVP1 670 aaKnown RBP6.7□□□□□ -1.34
ZEB1-223ENST00000561304 TAS2R10Q9NYW0 307 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 TAS2R9Q9NYW1 312 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 CRIM1Q9NZV1 1036 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 CLCF1Q9UBD9 225 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 KCNN3Q9UGI6 736 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 FOXD3Q9UJU5 478 aaPredicted RBP6.7□□□□□ -1.34
ZEB1-223ENST00000561304 CBLCQ9ULV8 474 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 FREM1Q5H8C1 2179 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 ITPR3Q14573 2671 aa6.7□□□□□ -1.34
ZEB1-223ENST00000561304 CLCA1A8K7I4 914 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 H0Y3Z8 333 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 H0YC42 278 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 H3BQF6 201 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 SLC28A1O00337 649 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 SYT5O00445 386 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 DVL2O14641 736 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 PIP5K1BO14986 540 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 NPHS1O60500 1241 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 CBR3O75828 277 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 IL33O95760 270 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 TGM6O95932 706 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 ACTL6AO96019 429 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 ACP2P11117 423 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 CPN1P15169 458 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 ZNF708P17019 499 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 DPP4P27487 766 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 MAP3K8P41279 467 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 FRKP42685 505 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-223ENST00000561304 RFX3P48380 749 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 TPD52P55327 224 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-223ENST00000561304 EFR3AQ14156 821 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 GRAMD1BQ3KR37 738 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 FBXL19-AS1Q494R0 122 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 XKR7Q5GH72 579 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 ARL13AQ5H913 290 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-223ENST00000561304 NKAPLQ5M9Q1 402 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 EXOC3L1Q86VI1 746 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 GCNT2Q8N0V5 402 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 CLYBLQ8N0X4 340 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 ZPLD1Q8TCW7 415 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 TCP10LQ8TDR4 215 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 WFDC12Q8WWY7 111 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.69□□□□□ -1.342e-9■■■■■ 44.1
ZEB1-223ENST00000561304 HOXB13Q92826 284 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-223ENST00000561304 PKNOX2Q96KN3 472 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 SFXN2Q96NB2 322 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 NPAS1Q99742 590 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 CCT7Q99832 543 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 LIME1Q9H400 295 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 DSN1Q9H410 356 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 REEP4Q9H6H4 257 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 CALHM2Q9HA72 323 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 SIRT3Q9NTG7 399 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-223ENST00000561304 FBXO34Q9NWN3 711 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 JKAMPQ9P055 326 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 MED11Q9P086 117 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 PPP4R1LQ9P1A2 415 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 DKKL1Q9UK85 242 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 OR10H1Q9Y4A9 318 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 PRR14LQ5THK1 2151 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 ABCA4P78363 2273 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 FAM221AA4D161 298 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 EEF1E1-BLOC1S5C9J1V9 151 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 FAM47E-STBD1D6RA91 191 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 LINC01387J3KSC0 135 aa6.69□□□□□ -1.34
ZEB1-223ENST00000561304 EEF1E1O43324 174 aaKnown RBP6.69□□□□□ -1.34
ZEB1-223ENST00000561304 RGS14O43566 566 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms