RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 ZAR1Q86SH2 424 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 GRAMD2AQ8IUY3 354 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 NUDCD3Q8IVD9 361 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 HOMEZQ8IX15 550 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 KRTCAP2Q8N6L1 136 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 SLC16A11Q8NCK7 471 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 PPP1R14CQ8TAE6 165 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 DUSP19Q8WTR2 217 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 TUBGCP3Q96CW5 907 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 FAM120BQ96EK7 910 aaKnown RBP15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 C1GALT1C1Q96EU7 318 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 LRRC46Q96FV0 321 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 C16orf58Q96GQ5 468 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 TM9SF2Q99805 663 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 ZNF395Q9H8N7 513 aaPredicted RBP15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 SDHAF3Q9NRP4 125 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 ZCCHC3Q9NUD5 404 aaKnown RBP15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 NTMQ9P121 344 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 ITPR3Q14573 2671 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 PRR14LQ5THK1 2151 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 SEC14L5O43304 696 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 CTIFO43310 598 aaKnown RBP15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 ANGPTL1O95841 491 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 POU3F2P20265 443 aaPredicted RBP15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 OPRM1P35372 400 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 CLK3P49761 638 aaKnown RBP15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 GANABQ14697 944 aaKnown RBP15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 CHI3L2Q15782 390 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 PDCD2Q16342 344 aaPredicted RBP15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 FLYWCH1Q4VC44 716 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 IL23RQ5VWK5 629 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 COX18Q8N8Q8 333 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 GATSQ8NAP1 163 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 INTS12Q96CB8 462 aaKnown RBP15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 PPP1R36Q96LQ0 422 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 CENPHQ9H3R5 247 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 PTGES2Q9H7Z7 377 aa15.55■□□□□ 0.08
CDC42BPB-208ENST00000561271 OR2M5A3KFT3 312 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 SHISA8B8ZZ34 492 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 H0YC42 278 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 H3BML4 177 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 HCRTR2O43614 444 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 KCNK2O95069 426 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 OXSR1O95747 527 aaPredicted RBP15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 TGM6O95932 706 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 IL18BPO95998 194 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 ALOX5P09917 674 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 DDX5P17844 614 aaKnown RBP15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 RPL3P39023 403 aaKnown RBP15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 TPD52P55327 224 aaPredicted RBP15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 PRR5P85299 388 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 LASP1Q14847 261 aaKnown RBP15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 CEP85LQ5SZL2 805 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 CCNJQ5T5M9 372 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 CPTPQ5TA50 214 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 ZNF781Q8N8C0 355 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 SMPDL3BQ92485 455 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 WNT2BQ93097 391 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 CHMP6Q96FZ7 201 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 ZFP3Q96NJ6 502 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 UCN2Q96RP3 112 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 GPATCH1Q9BRR8 931 aaKnown RBP15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 SFXN3Q9BWM7 321 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 FBXO34Q9NWN3 711 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 RAB21Q9UL25 225 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 SNX8Q9Y5X2 465 aa15.54■□□□□ 0.08
CDC42BPB-208ENST00000561271 IGLV3-32A0A0A0MS00 114 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 A0A1W2PRB8 838 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 RCBTB2O95199 551 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 C6orf47O95873 294 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 SERPINE1P05121 402 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 HMGN2P05204 90 aaKnown RBP15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 PEPDP12955 493 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 PRIM2P49643 509 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 TP53BP2Q13625 1128 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 MLC1Q15049 377 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 EXOSC6Q5RKV6 272 aaKnown RBP15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 P4HA3Q7Z4N8 544 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 LUZP2Q86TE4 346 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 OR4C3Q8NH37 302 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 CDS1Q92903 461 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 ZIM3Q96PE6 472 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 CXorf36Q9H7Y0 433 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 SSU72Q9NP77 194 aaKnown RBP15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 DNAJB12Q9NXW2 375 aaKnown RBP15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 JKAMPQ9P055 326 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 FOXD3Q9UJU5 478 aaPredicted RBP15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 VDAC3Q9Y277 283 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 ZNF337Q9Y3M9 751 aa15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 MAP1AP78559 2803 aaPredicted RBP15.53■□□□□ 0.08
CDC42BPB-208ENST00000561271 SLC22A20A6NK97 555 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 ALG1L2C9J202 215 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 NDUFB5O43674 189 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 CTAG2O75638 210 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 DHRS4L1P0CG22 281 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 G6PDP11413 515 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 PEX19P40855 299 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 CPA2P48052 419 aa15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 SUCLG1P53597 346 aaKnown RBP15.52■□□□□ 0.08
CDC42BPB-208ENST00000561271 CLDN15P56746 228 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms