RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 UQCRC1P31930 480 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 FRKP42685 505 aaPredicted RBP14.46□□□□□ -0.09
LMX1B-204ENST00000561065 PRKAG1P54619 331 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 CLDN8P56748 225 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 SRYQ05066 204 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 BST1Q10588 318 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 FOXF2Q12947 444 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 MPP2Q14168 576 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 SZRD1Q7Z422 152 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 TMEM200AQ86VY9 491 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 ZZZ3Q8IYH5 903 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 NUP43Q8NFH3 380 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 ZPLD1Q8TCW7 415 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 GPR151Q8TDV0 419 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 HOXB13Q92826 284 aaPredicted RBP14.46□□□□□ -0.09
LMX1B-204ENST00000561065 TLCD1Q96CP7 247 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 COQ8BQ96D53 544 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 C3orf30Q96M34 536 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 NEUROD4Q9HD90 331 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 EQTNQ9NQ60 294 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 CRIM1Q9NZV1 1036 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 NTMQ9P121 344 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 ZNF629Q9UEG4 869 aaPredicted RBP14.46□□□□□ -0.09
LMX1B-204ENST00000561065 DKKL1Q9UK85 242 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 ABCG2Q9UNQ0 655 aa14.46□□□□□ -0.09
LMX1B-204ENST00000561065 RPH3AQ9Y2J0 694 aaPredicted RBP14.46□□□□□ -0.09
LMX1B-204ENST00000561065 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 CLCA1A8K7I4 914 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 H0Y3Z8 333 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 SYT5O00445 386 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 CFLARO15519 480 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 ALOX5P09917 674 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 ZNF708P17019 499 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 EFNA1P20827 205 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-204ENST00000561065 GABRA3P34903 492 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 MAP3K8P41279 467 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 CLNS1AP54105 237 aaKnown RBP14.45□□□□□ -0.1
LMX1B-204ENST00000561065 STX5Q13190 355 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 DPY19L1Q2PZI1 675 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 SPDYE7PQ495Y7 208 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 ANXA8L1Q5VT79 327 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 CES4AQ5XG92 561 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 SPATA19Q7Z5L4 167 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 OR2M3Q8NG83 312 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 OR56A1Q8NGH5 318 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 FBXO30Q8TB52 745 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 MGARPQ8TDB4 240 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 PIK3R3Q92569 461 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 RNASE6Q93091 150 aaKnown RBP14.45□□□□□ -0.1
LMX1B-204ENST00000561065 GIMAP5Q96F15 307 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 SFXN2Q96NB2 322 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 MS4A4EQ96PG1 132 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 C1orf50Q9BV19 199 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 DUSP26Q9BV47 211 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 DPY30Q9C005 99 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 PTGES2Q9H7Z7 377 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 AKTIPQ9H8T0 292 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 CALHM2Q9HA72 323 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 JKAMPQ9P055 326 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 PPP4R1LQ9P1A2 415 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 STOML1Q9UBI4 398 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 FAF1Q9UNN5 650 aaPredicted RBP14.45□□□□□ -0.1
LMX1B-204ENST00000561065 SNX8Q9Y5X2 465 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 MPDZO75970 2070 aa14.45□□□□□ -0.1
LMX1B-204ENST00000561065 HDAC3O15379 428 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 IL33O95760 270 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 ACP2P11117 423 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 G6PDP11413 515 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 HPGDP15428 266 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 CTSSP25774 331 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 DPP4P27487 766 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 RFX3P48380 749 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 CCT3P49368 545 aaKnown RBP14.44□□□□□ -0.1
LMX1B-204ENST00000561065 CLDN15P56746 228 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 C21orf58P58505 322 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 RCAN2Q14206 197 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 PTGR1Q14914 329 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 PGS1Q32NB8 556 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 ENPP6Q6UWR7 440 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 APOOLQ6UXV4 268 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 GALNT10Q86SR1 603 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 OR4K17Q8NGC6 315 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 SLC9A6Q92581 669 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 CHMP6Q96FZ7 201 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 GPATCH1Q9BRR8 931 aaKnown RBP14.44□□□□□ -0.1
LMX1B-204ENST00000561065 NUF2Q9BZD4 464 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 ACBD3Q9H3P7 528 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 DSN1Q9H410 356 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 VIPAS39Q9H9C1 493 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 MEAF6Q9HAF1 191 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 SIRT3Q9NTG7 399 aaPredicted RBP14.44□□□□□ -0.1
LMX1B-204ENST00000561065 FAM120CQ9NX05 1096 aaKnown RBP14.44□□□□□ -0.1
LMX1B-204ENST00000561065 MED11Q9P086 117 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 MRPS18CQ9Y3D5 142 aaKnown RBP14.44□□□□□ -0.1
LMX1B-204ENST00000561065 MED13LQ71F56 2210 aa14.44□□□□□ -0.1
LMX1B-204ENST00000561065 FAM221AA4D161 298 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 DUXAA6NLW8 204 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 EEF1E1-BLOC1S5C9J1V9 151 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 H0YC42 278 aa14.43□□□□□ -0.1
LMX1B-204ENST00000561065 KLF11O14901 512 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms