RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 BTLAQ7Z6A9 289 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 EXOC3L1Q86VI1 746 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 CEP70Q8NHQ1 597 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 GPR151Q8TDV0 419 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 PIK3R3Q92569 461 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 PPCDCQ96CD2 204 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 ZBED6CLQ96FA7 236 aaPredicted RBP14.61□□□□□ -0.07
SNX1-213ENST00000561026 PGM2Q96G03 612 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 GATA5Q9BWX5 397 aaPredicted RBP14.61□□□□□ -0.07
SNX1-213ENST00000561026 IQCGQ9H095 443 aaKnown RBP14.61□□□□□ -0.07
SNX1-213ENST00000561026 REEP4Q9H6H4 257 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 RNF122Q9H9V4 155 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 NTMQ9P121 344 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 MID2Q9UJV3 735 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 ZNF175Q9Y473 711 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 TESMINQ9Y4I5 508 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 DNAJC15Q9Y5T4 150 aa14.61□□□□□ -0.07
SNX1-213ENST00000561026 H3BML4 177 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 AKAP10O43572 662 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 TRIM13O60858 407 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 NKX2-2O95096 273 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 LINC00032P0C843 101 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 NEFHP12036 1026 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 FRKP42685 505 aaPredicted RBP14.6□□□□□ -0.07
SNX1-213ENST00000561026 PRKAG1P54619 331 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 MANFP55145 182 aaKnown RBP14.6□□□□□ -0.07
SNX1-213ENST00000561026 OCRLQ01968 901 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 PDE7AQ13946 482 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 PCLAFQ15004 111 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 PON3Q15166 354 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 TMEM44Q2T9K0 475 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 ZNF385BQ569K4 471 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 KANK2Q63ZY3 851 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 ZNF474Q6S9Z5 364 aaPredicted RBP14.6□□□□□ -0.07
SNX1-213ENST00000561026 CDRT4Q8N9R6 151 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 OR4C3Q8NH37 302 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 ZFP28Q8NHY6 868 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 FNDC9Q8TBE3 224 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 TSSK3Q96PN8 268 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 DLL4Q9NR61 685 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 ACSS1Q9NUB1 689 aaPredicted RBP14.6□□□□□ -0.07
SNX1-213ENST00000561026 SH3BP4Q9P0V3 963 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 BAIAP2L1Q9UHR4 511 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 TMED5Q9Y3A6 229 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 FIS1Q9Y3D6 152 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 AP4B1Q9Y6B7 739 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 PCNX3Q9H6A9 2034 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 ALG1L2C9J202 215 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 LSM1O15116 133 aaKnown RBP14.6□□□□□ -0.07
SNX1-213ENST00000561026 EMC8O43402 210 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 CHEK2O96017 543 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 CGAP01215 116 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 NGFRP08138 427 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 FGF4P08620 206 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 CD79BP40259 229 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 RPL38P63173 70 aaKnown RBP14.6□□□□□ -0.07
SNX1-213ENST00000561026 HOMEZQ8IX15 550 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 METTL25Q8N6Q8 603 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 NUP43Q8NFH3 380 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.6□□□□□ -0.072e-6■■■■■ 29
SNX1-213ENST00000561026 GIMAP5Q96F15 307 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 ZNF845Q96IR2 970 aaPredicted RBP14.6□□□□□ -0.07
SNX1-213ENST00000561026 WFIKKN1Q96NZ8 548 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 FAM111AQ96PZ2 611 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 SLC39A3Q9BRY0 314 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 OPN3Q9H1Y3 402 aaPredicted RBP14.6□□□□□ -0.07
SNX1-213ENST00000561026 ELOVL5Q9NYP7 299 aa14.6□□□□□ -0.07
SNX1-213ENST00000561026 EIF3LQ9Y262 564 aaKnown RBP14.6□□□□□ -0.07
SNX1-213ENST00000561026 CTIFO43310 598 aaKnown RBP14.59□□□□□ -0.07
SNX1-213ENST00000561026 NDUFB5O43674 189 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 GMFGO60234 142 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 FOSL1P15407 271 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 CD53P19397 219 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 UGT2B10P36537 528 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 RPS3AP61247 264 aaKnown RBP14.59□□□□□ -0.07
SNX1-213ENST00000561026 SIRPAP78324 504 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 FGFBP1Q14512 234 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 UGT3A2Q3SY77 523 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 GALNT10Q86SR1 603 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 SLC16A11Q8NCK7 471 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 CLHC1Q8NHS4 586 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 FAM110BQ8TC76 370 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 SLC9A6Q92581 669 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 MS4A4EQ96PG1 132 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 HHATLQ9HCP6 504 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 MKS1Q9NXB0 559 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 KLHL28Q9NXS3 571 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 TRAF6Q9Y4K3 522 aa14.59□□□□□ -0.07
SNX1-213ENST00000561026 TLDC2A0PJX2 215 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 SHISA8B8ZZ34 492 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 AQP8O94778 261 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 KCNK2O95069 426 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 OXSR1O95747 527 aaPredicted RBP14.58□□□□□ -0.08
SNX1-213ENST00000561026 CHRNGP07510 517 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 CD8BP10966 210 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 ACP2P11117 423 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 BCKDHAP12694 445 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 TBXA2RP21731 343 aa14.58□□□□□ -0.08
SNX1-213ENST00000561026 ALDH3A1P30838 453 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms