RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ESPNLQ6ZVH7 1005 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 MARCH3Q86UD3 253 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 DTX2Q86UW9 622 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 FAM9CQ8IZT9 166 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 GABRG1Q8N1C3 465 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 OR10H5Q8NGA6 315 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 TRAF4Q9BUZ4 470 aaPredicted RBP16.53■□□□□ 0.24
TPM1-226ENST00000560959 TRIM2Q9C040 744 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 RNF14Q9UBS8 474 aa16.53■□□□□ 0.24
TPM1-226ENST00000560959 A0A096LNT2 108 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 C7orf72A4D263 438 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 CD8AP01732 235 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 PABPC4LP0CB38 370 aaKnown RBP16.52■□□□□ 0.24
TPM1-226ENST00000560959 TYK2P29597 1187 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 GSTM5P46439 218 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 DSCR9P59020 149 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 KRTAP24-1Q3LI83 254 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 SFRP5Q5T4F7 317 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 LGSNQ5TDP6 509 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 PPP4R4Q6NUP7 873 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 MFSD12Q6NUT3 480 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 GALNT10Q86SR1 603 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 GTPBP8Q8N3Z3 284 aaPredicted RBP16.52■□□□□ 0.24
TPM1-226ENST00000560959 PIWIL2Q8TC59 973 aaKnown RBP16.52■□□□□ 0.24
TPM1-226ENST00000560959 EXOSC8Q96B26 276 aaKnown RBP16.52■□□□□ 0.24
TPM1-226ENST00000560959 TNFRSF13CQ96RJ3 184 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 BEX2Q9BXY8 128 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 ALG2Q9H553 416 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 Q9N2J8 555 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 FAIMQ9NVQ4 179 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 FBXO34Q9NWN3 711 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 GRHL1Q9NZI5 618 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 FLRT3Q9NZU0 649 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 SENP1Q9P0U3 644 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 XPR1Q9UBH6 696 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 C19orf53Q9UNZ5 99 aaPredicted RBP16.52■□□□□ 0.24
TPM1-226ENST00000560959 SAR1BQ9Y6B6 198 aa16.52■□□□□ 0.24
TPM1-226ENST00000560959 PRR14LQ5THK1 2151 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 TTC36A6NLP5 189 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 GPRIN2O60269 458 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 DLX3O60479 287 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 ANGPTL1O95841 491 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 IL3P08700 152 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 PYGBP11216 843 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 AGTR1P30556 359 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 MAGEA4P43358 317 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 VLDLRP98155 873 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 CAV1Q03135 178 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 LOXL1Q08397 574 aaPredicted RBP16.51■□□□□ 0.23
TPM1-226ENST00000560959 ZNF155Q12901 538 aaPredicted RBP16.51■□□□□ 0.23
TPM1-226ENST00000560959 P2RY6Q15077 328 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 TAB1Q15750 504 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 TMEM249Q2WGJ8 235 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 SH2D4BQ5SQS7 431 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 PDSS1Q5T2R2 415 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 LETMD1Q6P1Q0 360 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 FIGNL1Q6PIW4 674 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 SSX8Q7RTT4 187 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 OR2V1Q8NHB1 315 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 ZBTB8AQ96BR9 441 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 KCNK17Q96T54 332 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 C1QTNF3Q9BXJ4 246 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 TBL1XR1Q9BZK7 514 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 DPH5Q9H2P9 285 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 GP6Q9HCN6 339 aa16.51■□□□□ 0.23
TPM1-226ENST00000560959 ELOA3DA6NLF2 546 aaPredicted RBP16.5■□□□□ 0.23
TPM1-226ENST00000560959 MYO1GB0I1T2 1018 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 CXCL13O43927 109 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 NDUFS7O75251 213 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 SMIM24O75264 130 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 PSMG1O95456 288 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 RPS17P08708 135 aaKnown RBP16.5■□□□□ 0.23
TPM1-226ENST00000560959 IL32P24001 234 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 SERPINB8P50452 374 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 GUCY2DQ02846 1103 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 FAPQ12884 760 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 CSTF3Q12996 717 aaKnown RBP16.5■□□□□ 0.23
TPM1-226ENST00000560959 ELOA3BQ3SY89 546 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 CPTPQ5TA50 214 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 PLD6Q8N2A8 252 aaKnown RBP16.5■□□□□ 0.23
TPM1-226ENST00000560959 ELOA3Q8NG57 546 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 ACTRT2Q8TDY3 377 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 ZNF483Q8TF39 744 aaPredicted RBP16.5■□□□□ 0.23
TPM1-226ENST00000560959 NEUROG1Q92886 237 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 HBEGFQ99075 208 aa16.5■□□□□ 0.23
TPM1-226ENST00000560959 CISD1Q9NZ45 108 aaKnown RBP16.5■□□□□ 0.23
TPM1-226ENST00000560959 GDF2Q9UK05 429 aaPredicted RBP16.5■□□□□ 0.23
TPM1-226ENST00000560959 IGHV4-30-2A0A087WSY4 118 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 DPRXA6NFQ7 191 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 SHISA8B8ZZ34 492 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 PCDH7O60245 1069 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 UTS2O95399 124 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 PSMA4P25789 261 aaKnown RBP16.49■□□□□ 0.23
TPM1-226ENST00000560959 RAE1P78406 368 aaKnown RBP16.49■□□□□ 0.23
TPM1-226ENST00000560959 BSPH1Q075Z2 132 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 RNPS1Q15287 305 aaKnown RBP16.49■□□□□ 0.23
TPM1-226ENST00000560959 ZNHIT3Q15649 155 aaPredicted RBP16.49■□□□□ 0.23
TPM1-226ENST00000560959 TMEM201Q5SNT2 666 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 HBMQ6B0K9 141 aa16.49■□□□□ 0.23
TPM1-226ENST00000560959 ALKBH2Q6NS38 261 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms