RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 AQP7O14520 342 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 SCO2O43819 266 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 AK1P00568 194 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 TBXA2RP21731 343 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 KHKP50053 298 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 MVDP53602 400 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 CASP9P55211 416 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 SLC10A1Q14973 349 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 METTL21CQ5VZV1 264 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 SLC2A7Q6PXP3 512 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 ZNF621Q6ZSS3 439 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 PLCZ1Q86YW0 608 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 FADS6Q8N9I5 356 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 OR4C3Q8NH37 302 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 ITCHQ96J02 903 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 PAIP1Q9H074 479 aaKnown RBP14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 SLC6A15Q9H2J7 730 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 KLHL14Q9P2G3 628 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 SPRR3Q9UBC9 169 aa14.12□□□□□ -0.15
RABGGTA-219ENST00000560871 GTF3C1Q12789 2109 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 MYO7BQ6PIF6 2116 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 IGLV3-32A0A0A0MS00 114 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 DUXAA6NLW8 204 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 NPIPB9F8W1W9 429 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 CCL21O00585 134 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 SUSD5O60279 629 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 HCN1O60741 890 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 PDE9AO76083 593 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 NCF2P19878 526 aaPredicted RBP14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 PTGS2P35354 604 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 CHI3L1P36222 383 aaPredicted RBP14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 TRPC1P48995 793 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 ARFIP2P53365 341 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 C3AR1Q16581 482 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 AGKQ53H12 422 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 PAGE3Q5JUK9 113 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 LRIF1Q5T3J3 769 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 TNFAIP8L2Q6P589 184 aaPredicted RBP14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 RNF130Q86XS8 419 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 NEIL3Q8TAT5 605 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 FAM57AQ8TBR7 257 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 C10orf82Q8WW14 230 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 SDF2Q99470 211 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 OR2B2Q9GZK3 357 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 ZNF350Q9GZX5 532 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 RABEP2Q9H5N1 569 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 TINAGQ9UJW2 476 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 FBXL2Q9UKC9 423 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 PCDHGB3Q9Y5G1 929 aa14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 DIDO1Q9BTC0 2240 aaKnown RBP14.11□□□□□ -0.15
RABGGTA-219ENST00000560871 TRGV5A0A0B4J1U4 118 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 NPIPA5A0A0B4J1W7 369 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 A0A1W2PQD3 144 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 PRAMEF27A3QJZ7 478 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 OR14I1A6ND48 311 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 NPIPA7E9PJI5 369 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 HMGN4O00479 90 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 CBR3O75828 277 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 ANGPTL1O95841 491 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 AGR2O95994 175 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 NPIPA8P0DM63 369 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 OR12D1P0DN82 309 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 ABOP16442 354 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 DCTP40126 519 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 SF3A3Q12874 501 aaKnown RBP eCLIP14.1□□□□□ -0.151e-7■■■■■ 33.9
RABGGTA-219ENST00000560871 ARHGAP11BQ3KRB8 267 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 COX20Q5RI15 118 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 C6orf10Q5SRN2 563 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 ZNF787Q6DD87 383 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 OR5M10Q6IEU7 315 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 MARCH3Q86UD3 253 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 CD163Q86VB7 1156 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 MSRB3Q8IXL7 192 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 FAM83FQ8NEG4 500 aaPredicted RBP14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 OR2M3Q8NG83 312 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 PNPT1Q8TCS8 783 aaKnown RBP14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 RAB8BQ92930 207 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 AURKBQ96GD4 344 aaPredicted RBP14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 TBL1XR1Q9BZK7 514 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 UBQLN4Q9NRR5 601 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 EXD2Q9NVH0 621 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 PPP4R1LQ9P1A2 415 aa14.1□□□□□ -0.15
RABGGTA-219ENST00000560871 A0A096LPI6 279 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 TRBV5-3A0A0A0MS03 114 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 A0A1W2PP18 115 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 KIAA0513O60268 411 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 ANP32DO95626 131 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 GUSBP08236 651 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 ATP6V1C1P21283 382 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 SRD5A2P31213 254 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 TXNL4AP83876 142 aaKnown RBP14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 STX5Q13190 355 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 CD226Q15762 336 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 FLYWCH1Q4VC44 716 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 EIPR1Q53HC9 387 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 EMC4Q5J8M3 183 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 AP1ARQ63HQ0 302 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 OLIG3Q7RTU3 272 aa14.09□□□□□ -0.15
RABGGTA-219ENST00000560871 ITLN2Q8WWU7 325 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms