RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 S100BP04271 92 aaPredicted RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 GSTA1P08263 222 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 IGHV4-31P0DP07 118 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 PYGBP11216 843 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 PCSK2P16519 638 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 HK1P19367 917 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 PSMB1P20618 241 aaKnown RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 DRD5P21918 477 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 IGFBP5P24593 272 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 PTX3P26022 381 aaPredicted RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 FEN1P39748 380 aaKnown RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 PPICP45877 212 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 NEK2P51955 445 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 ATP6V0D1P61421 351 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 MRPS35P82673 323 aaKnown RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 POU4F1Q01851 419 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 DLG1Q12959 904 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 CUL3Q13618 768 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 CTU2Q2VPK5 515 aaKnown RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 TRMT12Q53H54 448 aaKnown RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 NCMAPQ5T1S8 102 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 ALKBH2Q6NS38 261 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 IL17RELQ6ZVW7 336 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 TRPM8Q7Z2W7 1104 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 DTX2Q86UW9 622 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 MYLK4Q86YV6 388 aaPredicted RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 C10orf67Q8IYJ2 551 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 OR2M3Q8NG83 312 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 OR10H5Q8NGA6 315 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 OR4K17Q8NGC6 315 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 WDR20Q8TBZ3 569 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 ZNF75CPQ92670 426 aaPredicted RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 S100PBPQ96BU1 408 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 TMCO6Q96DC7 493 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 C11orf24Q96F05 449 aaPredicted RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 UBXN10Q96LJ8 280 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 HS6ST2Q96MM7 605 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 BTBD9Q96Q07 612 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 TNFRSF13CQ96RJ3 184 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 ATOH8Q96SQ7 321 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 NTMT1Q9BV86 223 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 RTN4RQ9BZR6 473 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 TRIM2Q9C040 744 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 IQCGQ9H095 443 aaKnown RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 OR10A4Q9H209 315 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 DSN1Q9H410 356 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 ANKRA2Q9H9E1 313 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 LRTM1Q9HBL6 345 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 NUDT4Q9NZJ9 180 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 SLC17A7Q9P2U7 560 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 LPAR3Q9UBY5 353 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 GPR55Q9Y2T6 319 aaPredicted RBP8.85□□□□□ -0.99
TPM1-225ENST00000560679 EMC9Q9Y3B6 208 aa8.85□□□□□ -0.99
TPM1-225ENST00000560679 FAM234BA2RU67 622 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 SUPT3HB4E1H0 165 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 SHISA8B8ZZ34 492 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 SSX4O60224 188 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 SUPT3HO75486 399 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 SIX3O95343 332 aaPredicted RBP8.84□□□□□ -0.99
TPM1-225ENST00000560679 CT45A8P0DMV1 189 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 CT45A9P0DMV2 189 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 FCGR2AP12318 317 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 MTHFD2P13995 350 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 IL11P20809 199 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 ETV4P43268 484 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 PIK3CGP48736 1102 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 EEFSECP57772 596 aaKnown RBP8.84□□□□□ -0.99
TPM1-225ENST00000560679 LOXL1Q08397 574 aaPredicted RBP8.84□□□□□ -0.99
TPM1-225ENST00000560679 SF3A3Q12874 501 aaKnown RBP eCLIP8.84□□□□□ -0.99
TPM1-225ENST00000560679 TSC22D1Q15714 1073 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.84□□□□□ -0.99
TPM1-225ENST00000560679 CT45A2Q5DJT8 189 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 FAM180BQ6P0A1 224 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 SLC48A1Q6P1K1 146 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 DNAJC14Q6Y2X3 702 aaPredicted RBP8.84□□□□□ -0.99
TPM1-225ENST00000560679 ALPK2Q86TB3 2170 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 ZNF619Q8N2I2 560 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 TEX9Q8N6V9 391 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 ACMSDQ8TDX5 336 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 DTNBP1Q96EV8 351 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 GMPPAQ96IJ6 420 aaPredicted RBP8.84□□□□□ -0.99
TPM1-225ENST00000560679 ADGRG7Q96K78 797 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 VSTM2LQ96N03 204 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 GPR22Q99680 433 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 RHNO1Q9BSD3 238 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 PLA2G12AQ9BZM1 189 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 SHARPINQ9H0F6 387 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 RASSF4Q9H2L5 321 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 BARX1Q9HBU1 254 aaPredicted RBP8.84□□□□□ -0.99
TPM1-225ENST00000560679 FLRT3Q9NZU0 649 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 KLHL14Q9P2G3 628 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 GPR52Q9Y2T5 361 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 PCDHGA11Q9Y5H2 935 aa8.84□□□□□ -0.99
TPM1-225ENST00000560679 TRRAPQ9Y4A5 3859 aa8.83□□□□□ -1
TPM1-225ENST00000560679 FREM1Q5H8C1 2179 aa8.83□□□□□ -1
TPM1-225ENST00000560679 TGP01266 2768 aa8.83□□□□□ -1
TPM1-225ENST00000560679 HMX2A2RU54 273 aa8.83□□□□□ -1
TPM1-225ENST00000560679 ELOA3DA6NLF2 546 aaPredicted RBP8.83□□□□□ -1
TPM1-225ENST00000560679 FOXE1O00358 373 aaPredicted RBP8.83□□□□□ -1
TPM1-225ENST00000560679 SCO2O43819 266 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms