RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 PMM1Q92871 262 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 EFHD2Q96C19 240 aaPredicted RBP12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 ZNF703Q9H7S9 590 aaPredicted RBP12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 PROK2Q9HC23 129 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 ACKR4Q9NPB9 350 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 SERHLQ9NQF3 203 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 PLSCR2Q9NRY7 297 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 POMPQ9Y244 141 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 NDUFAF1Q9Y375 327 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 L3MBTL1Q9Y468 752 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 WIF1Q9Y5W5 379 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 GMEB1Q9Y692 573 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 CFAP46Q8IYW2 2715 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 ZNF462Q96JM2 2506 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 NUP214P35658 2090 aaPredicted RBP12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 A0A1W2PQD3 144 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 OR14I1A6ND48 311 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 NR5A2O00482 541 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 SNPHO15079 494 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 SUSD5O60279 629 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 HCN1O60741 890 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 ICOSLGO75144 302 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 CBR3O75828 277 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 IGHG3P01860 377 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 CYP4B1P13584 511 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 HPGDP15428 266 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 DNASE1L1P49184 302 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 PMP22Q01453 160 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 CCNIQ14094 377 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 MMEL1Q495T6 779 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 C1orf146Q5VVC0 180 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 TIGD3Q6B0B8 471 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 ZNF621Q6ZSS3 439 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 EID3Q8N140 333 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 ZNF527Q8NB42 609 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 OR1J4Q8NGS1 313 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 PIK3R3Q92569 461 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 GTF2H4Q92759 462 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 ROPN1LQ96C74 230 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 C16orf58Q96GQ5 468 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 OR7D2Q96RA2 312 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 NODALQ96S42 347 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 GPATCH1Q9BRR8 931 aaKnown RBP12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 UBQLN4Q9NRR5 601 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 TUBA8Q9NY65 449 aaPredicted RBP12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 LEF1Q9UJU2 399 aaPredicted RBP12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 CORO2BQ9UQ03 480 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 LIPT1Q9Y234 373 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 A0A096LPI6 279 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 ALG1L2C9J202 215 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 NPIPA5E9PKD4 350 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 STX11O75558 287 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 TBXA2RP21731 343 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 MST1P26927 711 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 GCKP35557 465 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 PTGDSP41222 190 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 CASP6P55212 293 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 C17orf67Q0P5P2 114 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 FADDQ13158 208 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 GNA13Q14344 377 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 GANABQ14697 944 aaKnown RBP12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 SLC10A1Q14973 349 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 ARHGAP11BQ3KRB8 267 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 C6orf10Q5SRN2 563 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 DCST2Q5T1A1 773 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 LRIF1Q5T3J3 769 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 HEPHL1Q6MZM0 1159 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 GFRALQ6UXV0 394 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 TMEM251Q8N6I4 163 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 PCYOX1LQ8NBM8 494 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 ZFP90Q8TF47 636 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 CDS1Q92903 461 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 TBL1XR1Q9BZK7 514 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 UBQLN3Q9H347 655 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 NPIPA1Q9UND3 350 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 C15orf41Q9Y2V0 281 aa12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 MRPS18CQ9Y3D5 142 aaKnown RBP12.79□□□□□ -0.36
PKNOX1-209ENST00000560448 A0A1B0GVC2 190 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 GXYLT2A0PJZ3 443 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 PINLYPA6NC86 204 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 LRRC3CA6NJW4 275 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 C9JVG2 144 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 H3BNH8 94 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 FXYD1O00168 92 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 SCDO00767 359 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 ANGPT2O15123 496 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 FADS1O60427 444 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 UTS2O95399 124 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 HPCAP84074 193 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 CMPK2Q5EBM0 449 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 AAGABQ6PD74 315 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 ANGPTL8Q6UXH0 198 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 C16orf62Q7Z3J2 963 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 WDR53Q7Z5U6 358 aaPredicted RBP12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 PLCZ1Q86YW0 608 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 DPP10Q8N608 796 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 VPS33AQ96AX1 596 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 JSRP1Q96MG2 331 aaPredicted RBP12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 YIPF4Q9BSR8 244 aa12.78□□□□□ -0.36
PKNOX1-209ENST00000560448 INPP5KQ9BT40 448 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms