RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 PIWIL2Q8TC59 973 aaKnown RBP17.59■□□□□ 0.41
RABGGTA-214ENST00000560163 FBF1Q8TES7 1133 aa17.59■□□□□ 0.41
RABGGTA-214ENST00000560163 HSD17B8Q92506 261 aa17.59■□□□□ 0.41
RABGGTA-214ENST00000560163 EXOSC8Q96B26 276 aaKnown RBP17.59■□□□□ 0.41
RABGGTA-214ENST00000560163 KCNK17Q96T54 332 aa17.59■□□□□ 0.41
RABGGTA-214ENST00000560163 C12orf49Q9H741 205 aa17.59■□□□□ 0.41
RABGGTA-214ENST00000560163 NGBQ9NPG2 151 aa17.59■□□□□ 0.41
RABGGTA-214ENST00000560163 PFDN4Q9NQP4 134 aa17.59■□□□□ 0.41
RABGGTA-214ENST00000560163 FBXO34Q9NWN3 711 aa17.59■□□□□ 0.41
RABGGTA-214ENST00000560163 STOML1Q9UBI4 398 aa17.59■□□□□ 0.41
RABGGTA-214ENST00000560163 A0A096LPK6 155 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 STX16-NPEPL1H3BU86 382 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 CCDC188H7C350 402 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 HAX1O00165 279 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 STX16O14662 325 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 CXCL13O43927 109 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 IL33O95760 270 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 IL3P08700 152 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 ZNF17P17021 662 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 RAE1P78406 368 aaKnown RBP17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 PRR5P85299 388 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 C17orf67Q0P5P2 114 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 NAB1Q13506 487 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 LETMD1Q6P1Q0 360 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 WDR75Q8IWA0 830 aaKnown RBP17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 PLD6Q8N2A8 252 aaKnown RBP17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 SELENOMQ8WWX9 145 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 AMBRA1Q9C0C7 1298 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 SLC35C2Q9NQQ7 365 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 XPR1Q9UBH6 696 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 MCM8Q9UJA3 840 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 ZNF225Q9UK10 706 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 B3GALT5Q9Y2C3 310 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 SNX8Q9Y5X2 465 aa17.58■□□□□ 0.4
RABGGTA-214ENST00000560163 FREM1Q5H8C1 2179 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 A0A0J9YW62 118 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 FAM234BA2RU67 622 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 ELOA3DA6NLF2 546 aaPredicted RBP17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 RAMP1O60894 148 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 PSMG1O95456 288 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 ANGPTL1O95841 491 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 OPN1LWP04000 364 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 TUBBP07437 444 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 MRPS25P82663 173 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 NRF1Q16656 503 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 DECR1Q16698 335 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 ELOA3BQ3SY89 546 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 SH2D4BQ5SQS7 431 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 KLC3Q6P597 504 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 TFAP2EQ6VUC0 442 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 RPS27LQ71UM5 84 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 GTPBP8Q8N3Z3 284 aaPredicted RBP17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 ELOA3Q8NG57 546 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 NMRK1Q9NWW6 199 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 CISD1Q9NZ45 108 aaKnown RBP17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 GRHL1Q9NZI5 618 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 VPS29Q9UBQ0 182 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 LPAR3Q9UBY5 353 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 VDAC3Q9Y277 283 aa17.57■□□□□ 0.4
RABGGTA-214ENST00000560163 A0A087WV62 115 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 SHISA9B4DS77 424 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 SYNGR4O95473 234 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 NTN1O95631 604 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 ESRRBO95718 433 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 FESP07332 822 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 MPIP34949 423 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 CLK3P49761 638 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 RAC1P63000 192 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 SRSF2Q01130 221 aaKnown RBP17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 ZNF155Q12901 538 aaPredicted RBP17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 PRSS53Q2L4Q9 553 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 ESPNLQ6ZVH7 1005 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 FAM9CQ8IZT9 166 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 ZNF619Q8N2I2 560 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 OR2V1Q8NHB1 315 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 ERP44Q9BS26 406 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 SNX6Q9UNH7 406 aa17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 C19orf53Q9UNZ5 99 aaPredicted RBP17.56■□□□□ 0.4
RABGGTA-214ENST00000560163 C7orf72A4D263 438 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 MYO1GB0I1T2 1018 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 TNFSF11O14788 317 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 GMFGO60234 142 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 COQ9O75208 318 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 RPS17P08708 135 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 STX2P32856 288 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 IRX1P78414 480 aaPredicted RBP17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 CSTF3Q12996 717 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 CALCOCO2Q13137 446 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 GTF2IRD2BQ6EKJ0 949 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 NUFIP2Q7Z417 695 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 GTF2IRD2Q86UP8 949 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 USB1Q9BQ65 265 aaKnown RBP17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 DPH5Q9H2P9 285 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 ALG2Q9H553 416 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 TMCO1Q9UM00 188 aa17.55■□□□□ 0.4
RABGGTA-214ENST00000560163 A0A087WZY1 265 aa17.54■□□□□ 0.4
RABGGTA-214ENST00000560163 UPK1AO00322 258 aa17.54■□□□□ 0.4
RABGGTA-214ENST00000560163 UTS2O95399 124 aa17.54■□□□□ 0.4
RABGGTA-214ENST00000560163 OTCP00480 354 aa17.54■□□□□ 0.4
RABGGTA-214ENST00000560163 CHN1P15882 459 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms