RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 COL5A1P20908 1838 aaPredicted RBP7.54□□□□□ -1.2
SMAD3-212ENST00000559937 CEP192Q8TEP8 1941 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 TRBV23OR9-2A0A075B6M9 112 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 LOC105369274A0A096LPK9 316 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 LOC102723532A0A0G2JNH3 316 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 SPTY2D1-AS1A0A0U1RR47 76 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 IQCMA0A1B0GVH7 501 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 SLC35F4A4IF30 521 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 KRBA1A5PL33 1030 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 SURF4O15260 269 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 CHST10O43529 356 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 FGF17O60258 216 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 FCMRO60667 390 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 NKX2-2O95096 273 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 SLC35E2P0CK97 266 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 CKMT1AP12532 417 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 GALP22466 123 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 IGFBP4P22692 258 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 TRHRP34981 398 aaPredicted RBP7.53□□□□□ -1.2
SMAD3-212ENST00000559937 ETV5P41161 510 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 AVPR1BP47901 424 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 MTNR1AP48039 350 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 LSSP48449 732 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 ETV1P50549 477 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 PSMD7P51665 324 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 DGKEP52429 567 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 CDH11P55287 796 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 DEFA1P59665 94 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 DEFA3P59666 94 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 RPS3AP61247 264 aaKnown RBP7.53□□□□□ -1.2
SMAD3-212ENST00000559937 BDH1Q02338 343 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 MGAT2Q10469 447 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 MAP4K2Q12851 820 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 DSG2Q14126 1118 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 TCEA2Q15560 299 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 PRICKLE4Q2TBC4 344 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 TBC1D25Q3MII6 688 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 PLK5Q496M5 336 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 SPANXN2Q5MJ10 180 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 NXNL2Q5VZ03 156 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 ARMC6Q6NXE6 501 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF613Q6PF04 617 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 WDR53Q7Z5U6 358 aaPredicted RBP7.53□□□□□ -1.2
SMAD3-212ENST00000559937 LAPTM4BQ86VI4 370 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 GRAMD2AQ8IUY3 354 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 GID4Q8IVV7 300 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 NKAIN4Q8IVV8 208 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 PHC2Q8IXK0 858 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 OR4N4Q8N0Y3 316 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 SLC44A3Q8N4M1 653 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 CSNK1A1LQ8N752 337 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 PSD4Q8NDX1 1056 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 ANKK1Q8NFD2 765 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 OR52N1Q8NH53 320 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 SLC37A2Q8TED4 501 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 COL26A1Q96A83 441 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 ZG16BQ96DA0 208 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 RNFT2Q96EX2 444 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 FAM46AQ96IP4 442 aaKnown RBP7.53□□□□□ -1.2
SMAD3-212ENST00000559937 HS6ST2Q96MM7 605 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 NEURL2Q9BR09 285 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF559Q9BR84 538 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 LMF2Q9BU23 707 aaKnown RBP7.53□□□□□ -1.2
SMAD3-212ENST00000559937 NUAK2Q9H093 628 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 SEMA6CQ9H3T2 930 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 C6orf106Q9H6K1 298 aaPredicted RBP7.53□□□□□ -1.2
SMAD3-212ENST00000559937 ANKRA2Q9H9E1 313 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 UCK1Q9HA47 277 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 SMURF1Q9HCE7 757 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 EXOSC4Q9NPD3 245 aaKnown RBP7.53□□□□□ -1.2
SMAD3-212ENST00000559937 ADAP2Q9NPF8 381 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 CD93Q9NPY3 652 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 CTPS2Q9NRF8 586 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 EVA1BQ9NVM1 165 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 HRASLS2Q9NWW9 162 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 CLEC2DQ9UHP7 191 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF223Q9UK11 482 aaPredicted RBP7.53□□□□□ -1.2
SMAD3-212ENST00000559937 MRPS2Q9Y399 296 aaKnown RBP7.53□□□□□ -1.2
SMAD3-212ENST00000559937 NUP210LQ5VU65 1888 aa7.53□□□□□ -1.2
SMAD3-212ENST00000559937 CDHR4A6H8M9 788 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 LILRA5A6NI73 299 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 UNC119BA6NIH7 251 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 CHURC1-FNTBB4DL54 471 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 SLC30A4O14863 429 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 FRS3O43559 492 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 BRINP1O60477 761 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 SRPX2O60687 465 aaPredicted RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 RCBTB2O95199 551 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 LYPD3O95274 346 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 IGHA1P01876 353 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 THY1P04216 161 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 TSPAN19P0C672 248 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 LIMS3P0CW19 117 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 LIMS4P0CW20 117 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 THEGLP0DJG4 465 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 RNH1P13489 461 aaKnown RBP7.52□□□□□ -1.21
SMAD3-212ENST00000559937 CTSEP14091 401 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 GNSP15586 552 aa7.52□□□□□ -1.21
SMAD3-212ENST00000559937 NT5EP21589 574 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms