RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PABPC4LP0CB38 370 aaKnown RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 GSTT2P0CG29 244 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 GSTT2BP0CG30 244 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 TROVE2P10155 538 aaKnown RBP eCLIP3.03□□□□□ -1.92
SPG11-218ENST00000559754 PRKAR1AP10644 381 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 CAPN2P17655 700 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 AADACP22760 399 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 NF2P35240 595 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 FEN1P39748 380 aaKnown RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 SYKP43405 635 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 HTR5AP47898 357 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 CCT3P49368 545 aaKnown RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 OSTNP61366 133 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 DMTNQ08495 405 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 HAGHQ16775 308 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 SPANXN2Q5MJ10 180 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 CTSL3PQ5NE16 218 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 SLC25A30Q5SVS4 291 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 AADACL4Q5VUY2 407 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 LEG1Q6P5S2 330 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 ZNF562Q6V9R5 426 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 KIF6Q6ZMV9 814 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 GCNT7Q6ZNI0 430 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 Q6ZRG5 221 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 BZW1Q7L1Q6 419 aaKnown RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 GPR142Q7Z601 462 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 LINC00612Q8N6U2 182 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 GVQW1Q8N7I0 195 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 TCEANCQ8N8B7 351 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 C17orf47Q8NEP4 570 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 LRRC15Q8TF66 581 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 TSEN15Q8WW01 171 aaKnown RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 DNAJA4Q8WW22 397 aaPredicted RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 STARD8Q92502 1023 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 MYLPFQ96A32 169 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 MCUR1Q96AQ8 359 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 SH3YL1Q96HL8 342 aaPredicted RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 SLC45A3Q96JT2 553 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 C7orf34Q96L11 122 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 AGAP4Q96P64 663 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 RBM14Q96PK6 669 aaKnown RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 TRIM9Q9C026 710 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 POLR3FQ9H1D9 316 aaPredicted RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 CXXC4Q9H2H0 198 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 EHD1Q9H4M9 534 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 FNDC4Q9H6D8 234 aaPredicted RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 DCTPP1Q9H773 170 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 NEK6Q9HC98 313 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 UFSP2Q9NUQ7 469 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 C1orf123Q9NWV4 160 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 GPR83Q9NYM4 423 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 IKZF3Q9UKT9 509 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 RARRES3Q9UL19 164 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 CA5BQ9Y2D0 317 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 IFT52Q9Y366 437 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 KLF2Q9Y5W3 355 aaPredicted RBP3.03□□□□□ -1.92
SPG11-218ENST00000559754 CSNK1G3Q9Y6M4 447 aa3.03□□□□□ -1.92
SPG11-218ENST00000559754 SYNJ2O15056 1496 aa3.03□□□□□ -1.93
SPG11-218ENST00000559754 TRBV4-1A0A0J9YWV2 114 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 A0A1W2PPR1 153 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 A0A1W2PR80 420 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 SHISA7A6NL88 538 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 LMO7DNF2Z398 122 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 SPECC1L-ADORA2AF8WAN1 911 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 SLC1A7O00341 560 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 PGK1P00558 417 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 S100A9P06702 114 aaKnown RBP3.02□□□□□ -1.93
SPG11-218ENST00000559754 LYNP07948 512 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 TPM1P09493 284 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 SSR1P43307 286 aaKnown RBP3.02□□□□□ -1.93
SPG11-218ENST00000559754 MAGEA1P43355 309 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 OR1G1P47890 313 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 CD151P48509 253 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 PLA2G16P53816 162 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 BACE1P56817 501 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 SEC61GP60059 68 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 TGM3Q08188 693 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 ZP4Q12836 540 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 MAB21L1Q13394 359 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 LY6DQ14210 128 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 ZNF74Q16587 644 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 FAM106AQ4KMX7 169 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 C10orf120Q5SQS8 335 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 ATP1A1-AS1Q5TC04 95 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 LRRC66Q68CR7 880 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 KDM7AQ6ZMT4 941 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 LEKR1Q6ZMV7 388 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 ZNF841Q6ZN19 808 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 FRRS1Q6ZNA5 592 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 Q6ZR54 194 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 PYROXD2Q8N2H3 581 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 TRPV1Q8NER1 839 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 NANPQ8TBE9 248 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 M1APQ8TC57 530 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 APOBEC4Q8WW27 367 aaKnown RBP3.02□□□□□ -1.93
SPG11-218ENST00000559754 FAM3CQ92520 227 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 RPL3LQ92901 407 aaKnown RBP3.02□□□□□ -1.93
SPG11-218ENST00000559754 CAPNS2Q96L46 248 aa3.02□□□□□ -1.93
SPG11-218ENST00000559754 RPRD1AQ96P16 312 aaPredicted RBP3.02□□□□□ -1.93
SPG11-218ENST00000559754 CCNL2Q96S94 520 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms