RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 LMF2Q9BU23 707 aaKnown RBP11.76□□□□□ -0.53
TPM1-220ENST00000559556 GLIPR2Q9H4G4 154 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 GSTO2Q9H4Y5 243 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 Q9N2J8 555 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 MIEF1Q9NQG6 463 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 DDX18Q9NVP1 670 aaKnown RBP11.76□□□□□ -0.53
TPM1-220ENST00000559556 MRTO4Q9UKD2 239 aaKnown RBP11.76□□□□□ -0.53
TPM1-220ENST00000559556 PROCRQ9UNN8 238 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 TIMM22Q9Y584 194 aa11.76□□□□□ -0.53
TPM1-220ENST00000559556 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.76□□□□□ -0.53
TPM1-220ENST00000559556 TRIM64A6NGJ6 449 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 TRIM64BA6NI03 449 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 TTC36A6NLP5 189 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 AQP8O94778 261 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 THBDP07204 575 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 ABHD2P08910 425 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 PAX1P15863 534 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 ZNF17P17021 662 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 PTH2RP49190 550 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 CLK3P49761 638 aaKnown RBP11.75□□□□□ -0.53
TPM1-220ENST00000559556 PRR5P85299 388 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 BTKQ06187 659 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 C17orf67Q0P5P2 114 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 ZNHIT3Q15649 155 aaPredicted RBP11.75□□□□□ -0.53
TPM1-220ENST00000559556 BEX5Q5H9J7 111 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 LGSNQ5TDP6 509 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 PLEKHM3Q6ZWE6 761 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 MARCH3Q86UD3 253 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 MMGT1Q8N4V1 131 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 NOA1Q8NC60 698 aaKnown RBP11.75□□□□□ -0.53
TPM1-220ENST00000559556 OR6K3Q8NGY3 331 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 CDC26Q8NHZ8 85 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 FAM76AQ8TAV0 307 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 HOXB13Q92826 284 aaPredicted RBP11.75□□□□□ -0.53
TPM1-220ENST00000559556 ELP4Q96EB1 424 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 TBL1XR1Q9BZK7 514 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 PLSCR4Q9NRQ2 329 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 STOML1Q9UBI4 398 aa11.75□□□□□ -0.53
TPM1-220ENST00000559556 WBP11Q9Y2W2 641 aaKnown RBP11.75□□□□□ -0.53
TPM1-220ENST00000559556 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.74□□□□□ -0.53
TPM1-220ENST00000559556 SMAD7O15105 426 aaKnown RBP11.74□□□□□ -0.53
TPM1-220ENST00000559556 KLF4O43474 513 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 SS18L1O75177 396 aaPredicted RBP11.74□□□□□ -0.53
TPM1-220ENST00000559556 UTS2O95399 124 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 ANGPTL1O95841 491 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 PPP3CBP16298 524 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 MAP3K8P41279 467 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 FOXA1P55317 472 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 WHAMMP3Q1A5X7 153 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 GRAMD1BQ3KR37 738 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 SPDYAQ5MJ70 313 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 ANKRD34AQ69YU3 496 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 APOOLQ6UXV4 268 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 STAC2Q6ZMT1 411 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 IKBIPQ70UQ0 350 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 IFT81Q8WYA0 676 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 GMPPAQ96IJ6 420 aaPredicted RBP11.74□□□□□ -0.53
TPM1-220ENST00000559556 KLHL4Q9C0H6 718 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 MID1IP1Q9NPA3 183 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 EMC9Q9Y3B6 208 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 NBEAL1Q6ZS30 2694 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 ANK2Q01484 3957 aa11.74□□□□□ -0.53
TPM1-220ENST00000559556 C7orf72A4D263 438 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 KIAA1324LA8MWY0 1029 aaPredicted RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 SHISA8B8ZZ34 492 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 ALG1L2C9J202 215 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 UBFD1O14562 309 aaKnown RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 EIF1AYO14602 144 aaKnown RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 TMCC2O75069 709 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 KCNH1O95259 989 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 CNOT4O95628 575 aaKnown RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 IGKV1D-16P01601 117 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 NGFRP08138 427 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 GSTA1P08263 222 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 IL11P20809 199 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 PCSK6P29122 969 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 EIF1AXP47813 144 aaKnown RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 NR1H2P55055 460 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 SGCBQ16585 318 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 IMPG1Q17R60 797 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.73□□□□□ -0.53
TPM1-220ENST00000559556 EXOC3L2Q2M3D2 409 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 CTU2Q2VPK5 515 aaKnown RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 ZNF704Q6ZNC4 412 aaPredicted RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 TRIM46Q7Z4K8 759 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 GTPBP8Q8N3Z3 284 aaPredicted RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 ACMSDQ8TDX5 336 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 ZNF764Q96H86 408 aaPredicted RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 ADGRG7Q96K78 797 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 TMEM204Q9BSN7 226 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 C3orf14Q9HBI5 128 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 HHATLQ9HCP6 504 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 ZNF701Q9NV72 531 aaPredicted RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 PAQR5Q9NXK6 330 aaPredicted RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 VDAC3Q9Y277 283 aa11.73□□□□□ -0.53
TPM1-220ENST00000559556 POLR3HQ9Y535 204 aaPredicted RBP11.73□□□□□ -0.53
TPM1-220ENST00000559556 A0A087WZY1 265 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 GXYLT2A0PJZ3 443 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 INAFM1C9JVW0 142 aa11.72□□□□□ -0.53
TPM1-220ENST00000559556 H3BQF6 201 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms