RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 FESP07332 822 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 ICAM2P13598 275 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 TNFRSF1BP20333 461 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 FPR1P21462 350 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 ITPKBP27987 946 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 DNAJA1P31689 397 aaKnown RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 KCNC4Q03721 635 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 DUSP5Q16690 384 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 ATAD3BQ5T9A4 648 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 BROXQ5VW32 411 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 CHERPQ8IWX8 916 aaKnown RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 C9orf40Q8IXQ3 194 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 HS3ST5Q8IZT8 346 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 ZSCAN1Q8NBB4 408 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 C16orf52Q8NHV5 167 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 MAGEE2Q8TD90 523 aaPredicted RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 SDCCAG3Q96C92 435 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 RDH12Q96NR8 316 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 SPATA5L1Q9BVQ7 753 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 PIGUQ9H490 435 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 SMPD3Q9NY59 655 aaPredicted RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 COPS7AQ9UBW8 275 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 POLHQ9Y253 713 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 ENPP4Q9Y6X5 453 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 CHD8Q9HCK8 2581 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 PRKNO60260 465 aaPredicted RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 PRAMEF2O60811 474 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 COQ9O75208 318 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 H6PDO95479 791 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 ITGA2P17301 1181 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 OR1E2P47887 323 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 PPP1R8Q12972 351 aaKnown RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 PDK3Q15120 406 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 ARHGAP11BQ3KRB8 267 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 WDR53Q7Z5U6 358 aaPredicted RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 CDRT4Q8N9R6 151 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 CHDHQ8NE62 594 aaPredicted RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 ZNF354BQ96LW1 612 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 STACQ99469 402 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 EPYCQ99645 322 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 RBM4BQ9BQ04 359 aaKnown RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 RBM4Q9BWF3 364 aaKnown RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 AMBRA1Q9C0C7 1298 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 DUSP22Q9NRW4 184 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 SEC14L3Q9UDX4 400 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 DTX4Q9Y2E6 619 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 PCDHGB3Q9Y5G1 929 aa15.28■□□□□ 0.04
TPM1-219ENST00000559397 HEMK1Q9Y5R4 338 aaPredicted RBP15.28■□□□□ 0.04
TPM1-219ENST00000559397 TRBV11-1A0A0K0K1C0 115 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 ARGFXA6NJG6 315 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 OR6C76A6NM76 312 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 K7ENP7 123 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 ZIC2O95409 532 aaPredicted RBP15.27■□□□□ 0.03
TPM1-219ENST00000559397 RNF4P78317 190 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 MERTKQ12866 999 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 GPAT3Q53EU6 434 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 AP1ARQ63HQ0 302 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 INO80CQ6PI98 192 aaPredicted RBP15.27■□□□□ 0.03
TPM1-219ENST00000559397 UGT2A3Q6UWM9 527 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 OLIG3Q7RTU3 272 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 C16orf62Q7Z3J2 963 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 CARM1Q86X55 608 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 CDS1Q92903 461 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 ADI1Q9BV57 179 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 ANKRD60Q9BZ19 345 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 REEP1Q9H902 201 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 SMURF2Q9HAU4 748 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 ATP13A2Q9NQ11 1180 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 UBAP1Q9NZ09 502 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 PRODH2Q9UF12 536 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 MED13Q9UHV7 2174 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 SH3GLB1Q9Y371 365 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 SAMHD1Q9Y3Z3 626 aaKnown RBP15.27■□□□□ 0.03
TPM1-219ENST00000559397 U3KQV3 271 aa15.27■□□□□ 0.03
TPM1-219ENST00000559397 TMEM200CA6NKL6 621 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 A8MVJ9 347 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 ADAMDEC1O15204 470 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 DNAJB5O75953 348 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 SERPINA7P05543 415 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 ALOX5P09917 674 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 ITGAMP11215 1152 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 CHRNEQ04844 493 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 AIMP2Q13155 320 aaKnown RBP15.26■□□□□ 0.03
TPM1-219ENST00000559397 EBPQ15125 230 aaKnown RBP15.26■□□□□ 0.03
TPM1-219ENST00000559397 SLC36A3Q495N2 470 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 CYP27C1Q4G0S4 372 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 HSDL2Q6YN16 418 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 ZNF605Q86T29 641 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 OR8K3Q8NH51 312 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 SLC9A6Q92581 669 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 PROX1Q92786 737 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 ADIPOR1Q96A54 375 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 VSTM2LQ96N03 204 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 BARD1Q99728 777 aaKnown RBP15.26■□□□□ 0.03
TPM1-219ENST00000559397 FOLH1BQ9HBA9 442 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 CPNE5Q9HCH3 593 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 CFL2Q9Y281 166 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 DOCK10Q96BY6 2186 aa15.26■□□□□ 0.03
TPM1-219ENST00000559397 ZFAND5O76080 213 aa15.25■□□□□ 0.03
TPM1-219ENST00000559397 SOX30O94993 753 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms