RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 PCLAFQ15004 111 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 GALNTL6Q49A17 601 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 RFTN2Q52LD8 501 aaPredicted RBP18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 LIPMQ5VYY2 423 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 ANKRD34AQ69YU3 496 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 FIGNL1Q6PIW4 674 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 OR2W6PQ8NHA6 318 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 FAM76AQ8TAV0 307 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 MBD6Q96DN6 1003 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 DTNBP1Q96EV8 351 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 POM121Q96HA1 1249 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 KLHDC3Q9BQ90 382 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 GATA5Q9BWX5 397 aaPredicted RBP18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 PTGES2Q9H7Z7 377 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 C1orf109Q9NX04 203 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 GIMAP2Q9UG22 337 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 NDRG3Q9UGV2 375 aa18.46■□□□□ 0.55
TSPAN3-206ENST00000559373 TLDC2A0PJX2 215 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 SLC28A1O00337 649 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 MSTNO14793 375 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 AZIN1O14977 448 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 CHRNGP07510 517 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 ACP2P11117 423 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 PRPS2P11908 318 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 CD53P19397 219 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 KCNJ5P48544 419 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 CLK3P49761 638 aaKnown RBP18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 RNF144AP50876 292 aaPredicted RBP18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 RPL38P63173 70 aaKnown RBP18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 IKBIPQ70UQ0 350 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 CAMKMTQ7Z624 323 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 ZNF610Q8N9Z0 462 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 NUP43Q8NFH3 380 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 OR4C3Q8NH37 302 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 AGR3Q8TD06 166 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 NUDT8Q8WV74 236 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 C16orf58Q96GQ5 468 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 MRTO4Q9UKD2 239 aaKnown RBP18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 CLEC4AQ9UMR7 237 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 EIF3LQ9Y262 564 aaKnown RBP18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 TESMINQ9Y4I5 508 aa18.45■□□□□ 0.54
TSPAN3-206ENST00000559373 RGS14O43566 566 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 AQP8O94778 261 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 SLITRK5O94991 958 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 KCNH1O95259 989 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 MANFP55145 182 aaKnown RBP18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 SGCBQ16585 318 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 EXOC3L2Q2M3D2 409 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 CCNJQ5T5M9 372 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 C22orf34Q6ZV56 151 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 SLC16A11Q8NCK7 471 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 PPCDCQ96CD2 204 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 PIK3IP1Q96FE7 263 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 PIGQQ9BRB3 760 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 MECRQ9BV79 373 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 REEP4Q9H6H4 257 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 DLL4Q9NR61 685 aa18.44■□□□□ 0.54
TSPAN3-206ENST00000559373 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 EIF1AYO14602 144 aaKnown RBP18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 POU2F1P14859 743 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 HOXB4P17483 251 aaPredicted RBP18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 PRPH2P23942 346 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 CCKARP32238 428 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 CD79BP40259 229 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 SLC6A8P48029 635 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 C17orf67Q0P5P2 114 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 GANABQ14697 944 aaKnown RBP18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 OR2A2Q6IF42 318 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 DDIASQ8IXT1 998 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 GIMAP5Q96F15 307 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 SH3YL1Q96HL8 342 aaPredicted RBP18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 MED18Q9BUE0 208 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 RNF122Q9H9V4 155 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 C3orf14Q9HBI5 128 aa18.43■□□□□ 0.54
TSPAN3-206ENST00000559373 DEFB108AA8MXU0 73 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 CTIFO43310 598 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 TNFRSF21O75509 655 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 OXSR1O95747 527 aaPredicted RBP18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 CGAP01215 116 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 ALDH3A1P30838 453 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 MAP3K8P41279 467 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 EIF1AXP47813 144 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 PSMD4P55036 377 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 NAA20P61599 178 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 PRR5P85299 388 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 SLC18A2Q05940 514 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 DUSP5Q16690 384 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 GGNQ86UU5 652 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 KRTAP1-3Q8IUG1 177 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 JADE3Q92613 823 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 KLHL4Q9C0H6 718 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 TMEM185BQ9H7F4 350 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 UBTD1Q9HAC8 227 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 NEUROD4Q9HD90 331 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 WBP11Q9Y2W2 641 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 DNAJC15Q9Y5T4 150 aa18.42■□□□□ 0.54
TSPAN3-206ENST00000559373 NPIPB8E9PQR5 432 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 H3BQF6 201 aa18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 LSM1O15116 133 aaKnown RBP18.41■□□□□ 0.54
TSPAN3-206ENST00000559373 NDUFB5O43674 189 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms