RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CHRNEQ04844 493 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 KLHL26Q53HC5 615 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 ATAD3BQ5T9A4 648 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 IL20RBQ6UXL0 311 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 OLIG3Q7RTU3 272 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 CYP4Z2PQ8N1L4 340 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 ZNF619Q8N2I2 560 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 FBXW8Q8N3Y1 598 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 TMEM156Q8N614 296 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 POGLUT1Q8NBL1 392 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 C11orf65Q8NCR3 313 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 GRHL3Q8TE85 626 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 ZG16BQ96DA0 208 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 TREX2Q9BQ50 279 aaPredicted RBP13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 ECSITQ9BQ95 431 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 ANGPTL4Q9BY76 406 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 LRMDAQ9H2I8 198 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 ALG2Q9H553 416 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 HPF1Q9NWY4 346 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 PLA2G3Q9NZ20 509 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 FLRT3Q9NZU0 649 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 CNIH4Q9P003 139 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 LRFN1Q9P244 771 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 PRPF19Q9UMS4 504 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 CHST2Q9Y4C5 530 aa13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 GPC6Q9Y625 555 aaPredicted RBP13.58□□□□□ -0.24
SNRPA1-207ENST00000559309 MAST4O15021 2626 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 IGLV3-32A0A0A0MS00 114 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 CENPVL1A0A0U1RR11 272 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 AGAP5A6NIR3 686 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 NME2P1O60361 137 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 ICOSLGO75144 302 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 REM1O75628 298 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 UTS2O95399 124 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 OXSR1O95747 527 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 BCHEP06276 602 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 CCL3P10147 92 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 NME2P22392 152 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 CRISP3P54108 245 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 ATP12AP54707 1039 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 SCARB2Q14108 478 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 GNA13Q14344 377 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 OR1C1Q15619 314 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 MAPK14Q16539 360 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 GRAMD1BQ3KR37 738 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 SAMD4BQ5PRF9 694 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 SPINK14Q6IE38 97 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 REEP3Q6NUK4 255 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 ERICH5Q6P6B1 374 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 C16orf62Q7Z3J2 963 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 SLC30A8Q8IWU4 369 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 MICU2Q8IYU8 434 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 PSD4Q8NDX1 1056 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 HIPK4Q8NE63 616 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 FAM71CQ8NEG0 241 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 OR2T12Q8NG77 320 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 OR52E4Q8NGH9 312 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 BBS10Q8TAM1 723 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 CDRT15Q96T59 188 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 RTN4RQ9BZR6 473 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 HOXD1Q9GZZ0 328 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 MTHFD2LQ9H903 347 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 UBQLN4Q9NRR5 601 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 DEPPQ9NTK1 212 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 CALML5Q9NZT1 146 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 TP53TG5Q9Y2B4 290 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 WDR45Q9Y484 360 aa13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 TLN1Q9Y490 2541 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-207ENST00000559309 CNTRLQ7Z7A1 2325 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 ELOVL7A1L3X0 281 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 TP53I11O14683 189 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 GSC2O15499 205 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 TRIM3O75382 744 aaPredicted RBP13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 SP1P08047 785 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 FAM87AP0C7U9 286 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 NR2F1P10589 423 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 DCTP40126 519 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 ST13P50502 369 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 FOXO1Q12778 655 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 CYP51A1Q16850 503 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 DNAL1Q4LDG9 190 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 RPUSD3Q6P087 351 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 CATSPER1Q8NEC5 780 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 NFKBIDQ8NI38 313 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 TM9SF4Q92544 642 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 TMCO6Q96DC7 493 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 CADM1Q9BY67 442 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 ANKRD10Q9NXR5 420 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 MKLN1Q9UL63 735 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 L3MBTL1Q9Y468 752 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 TENM4Q6N022 2769 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 PIEZO2Q9H5I5 2752 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 COL6A6A6NMZ7 2263 aa13.56□□□□□ -0.24
SNRPA1-207ENST00000559309 SLC28A2O43868 658 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 SLC25A12O75746 678 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 EPPINO95925 133 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 THBS1P07996 1170 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 IL12BP29460 328 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 EVI2BP34910 448 aa13.55□□□□□ -0.24
SNRPA1-207ENST00000559309 KRT20P35900 424 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms