RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 Q6ZPB1 254 aaPredicted RBP1.92□□□□□ -2.1
GABPB1-209ENST00000559100 STOX1Q6ZVD7 989 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 CYS1Q717R9 158 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 HSD11B1LQ7Z5J1 315 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ANKRD37Q7Z713 158 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TGIF2LXQ8IUE1 241 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 MCOLN2Q8IZK6 566 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ARL14Q8N4G2 192 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 CLDN19Q8N6F1 224 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF614Q8N883 585 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 Q8N9P0 234 aaPredicted RBP1.92□□□□□ -2.1
GABPB1-209ENST00000559100 BEST4Q8NFU0 473 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 OR52K2Q8NGK3 314 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 OR5D13Q8NGL4 314 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 FAM76AQ8TAV0 307 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF671Q8TAW3 534 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 NANPQ8TBE9 248 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 M1APQ8TC57 530 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TMEM190Q8WZ59 177 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 EMG1Q92979 244 aaKnown RBP1.92□□□□□ -2.1
GABPB1-209ENST00000559100 NABP1Q96AH0 204 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 SLC41A3Q96GZ6 507 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TGM7Q96PF1 710 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 SLC30A2Q9BRI3 323 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TMEM121Q9BTD3 319 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 MAGT1Q9H0U3 335 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 METTL7AQ9H8H3 244 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 FN3KRPQ9HA64 309 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 TM9SF3Q9HD45 589 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 SCRT2Q9NQ03 307 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 SLC17A5Q9NRA2 495 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ETNK2Q9NVF9 386 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 NUDT4Q9NZJ9 180 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 GALPQ9UBC7 116 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 SUN2Q9UH99 717 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 ANAPC7Q9UJX3 599 aa1.92□□□□□ -2.1
GABPB1-209ENST00000559100 SALL1Q9NSC2 1324 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ATP10DQ9P241 1426 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 KANK1Q14678 1352 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 IGHV4-30-2A0A087WSY4 118 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 TRAV26-1A0A087WT03 109 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 A0A1B0GTH9 108 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 GOLGA8OA6NCC3 632 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 MPTX1A8MV57 137 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 E9PBE3 544 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 GOLGA8NF8WBI6 632 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 G3V4G9 280 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 GOLGA8SH3BPF8 625 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 IDH3BO43837 385 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 TYROBPO43914 113 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 TIMM8AO60220 97 aaPredicted RBP1.91□□□□□ -2.1
GABPB1-209ENST00000559100 FCMRO60667 390 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 TRIM3O75382 744 aaPredicted RBP1.91□□□□□ -2.1
GABPB1-209ENST00000559100 FRAT2O75474 233 aaPredicted RBP1.91□□□□□ -2.1
GABPB1-209ENST00000559100 F10P00742 488 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 IGF1P05019 195 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 WNT2P09544 360 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 HOXB7P09629 217 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 CCDC159P0C7I6 412 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ZSCAN5DPP0CG00 497 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 BCKDHAP12694 445 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 NCK1P16333 377 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 XRCC1P18887 633 aaPredicted RBP1.91□□□□□ -2.1
GABPB1-209ENST00000559100 MX1P20591 662 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 HMGCLP35914 325 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ACVR1BP36896 505 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 PGFP49763 221 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 AP3M2P53677 418 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF85Q03923 595 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 FCHO2Q0JRZ9 810 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 CUL1Q13616 776 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 MXD4Q14582 209 aaPredicted RBP1.91□□□□□ -2.1
GABPB1-209ENST00000559100 GANABQ14697 944 aaKnown RBP1.91□□□□□ -2.1
GABPB1-209ENST00000559100 SLC10A1Q14973 349 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 SIX1Q15475 284 aaPredicted RBP1.91□□□□□ -2.1
GABPB1-209ENST00000559100 TMEM44Q2T9K0 475 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 C14orf28Q4W4Y0 310 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 MS4A13Q5J8X5 152 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 MEDAGQ5VYS4 303 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ARMCX5Q6P1M9 558 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 TMEM184AQ6ZMB5 413 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 RUFY3Q7L099 469 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 MOB3BQ86TA1 216 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 FAM228AQ86W67 206 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 IFNEQ86WN2 208 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 CCDC65Q8IXS2 484 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 SLC35F2Q8IXU6 374 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 KLHDC8BQ8IXV7 354 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 TTC5Q8N0Z6 440 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 CLEC4FQ8N1N0 589 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 BBS5Q8N3I7 341 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 SPEM1Q8N4L4 309 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 DHRSXQ8N5I4 330 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ATP6V0D2Q8N8Y2 350 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 BBOF1Q8ND07 529 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 ZNRF1Q8ND25 227 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 OR2T33Q8NG76 320 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 OR9K2Q8NGE7 335 aa1.91□□□□□ -2.1
GABPB1-209ENST00000559100 OR4D5Q8NGN0 318 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms