RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 A0A1W2PNU3 283 aaPredicted RBP18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 H1F0P07305 194 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 THBS1P07996 1170 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 POU2F1P14859 743 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 HMGA2P52926 109 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 PLAURQ03405 335 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 EBPQ15125 230 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 TRIP6Q15654 476 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 LIN52Q52LA3 116 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 STPG1Q5TH74 334 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 CDCP2Q5VXM1 449 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 FAM198BQ6UWH4 519 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 ADIPOR1Q96A54 375 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 NR1H4Q96RI1 486 aaPredicted RBP18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 SLC26A1Q9H2B4 701 aa18.86■□□□□ 0.61
SNRPA1-205ENST00000558036 SOX30O94993 753 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 NTN1O95631 604 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 ELAVL4P26378 380 aaKnown RBP18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 PPICP45877 212 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 OR4C3Q8NH37 302 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 FNDC11Q9BVV2 318 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 RIBC2Q9H4K1 309 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 POLE3Q9NRF9 147 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 KRT84Q9NSB2 600 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 FAM118AQ9NWS6 357 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 FLRT3Q9NZU0 649 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 ORC6Q9Y5N6 252 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 CDHR4A6H8M9 788 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 SEC24DO94855 1032 aaPredicted RBP18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 MT-CO3P00414 261 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 LYNP07948 512 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 JMJD7P0C870 316 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 EPHA2P29317 976 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 GPR143P51810 404 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 LSM11P83369 360 aaKnown RBP eCLIP18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 DESI1Q6ICB0 168 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 SLCO6A1Q86UG4 719 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 SLC7A13Q8TCU3 470 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 FKBP10Q96AY3 582 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 LCORQ96JN0 433 aaPredicted RBP18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 PRRC1Q96M27 445 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 PHOX2BQ99453 314 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 NIPSNAP1Q9BPW8 284 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 G6PC3Q9BUM1 346 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 MAN2C1Q9NTJ4 1040 aa18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 GPN3Q9UHW5 284 aaPredicted RBP18.85■□□□□ 0.61
SNRPA1-205ENST00000558036 STK17BO94768 372 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 CCNYL3P0C7X3 344 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 TAS2R41P59536 307 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 HES3Q5TGS1 186 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 KRT80Q6KB66 452 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 MORN4Q8NDC4 146 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 DEFB124Q8NES8 71 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 GTPBP3Q969Y2 492 aaKnown RBP18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 ART5Q96L15 291 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 DHRS1Q96LJ7 313 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 MUS81Q96NY9 551 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 WDR77Q9BQA1 342 aaPredicted RBP18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 WWTR1Q9GZV5 400 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 ZNF223Q9UK11 482 aaPredicted RBP18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 CFL2Q9Y281 166 aa18.84■□□□□ 0.61
SNRPA1-205ENST00000558036 CCNB2O95067 398 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 NR0B1P51843 470 aaKnown RBP18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 ZNF136P52737 540 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 CHN2P52757 468 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 RAD23AP54725 363 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 MYBPC1Q00872 1141 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 EIPR1Q53HC9 387 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 ENTPD8Q5MY95 495 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 PAPD4Q6PIY7 484 aaKnown RBP18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 C16orf47Q6ZP98 133 aaPredicted RBP18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 PIP4P1Q86T03 277 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 AQP11Q8NBQ7 271 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 PIK3C3Q8NEB9 887 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 C7orf57Q8NEG2 295 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 ADAMTS16Q8TE57 1224 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 CNOT9Q92600 299 aaKnown RBP18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 LRFN5Q96NI6 719 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 RDH12Q96NR8 316 aa18.83■□□□□ 0.61
SNRPA1-205ENST00000558036 CELSR3Q9NYQ7 3312 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 LRP3O75074 770 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 MYF6P23409 242 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 DECR1Q16698 335 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 DCST1Q5T197 706 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 SWT1Q5T5J6 900 aaKnown RBP18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 RNF220Q5VTB9 566 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 HLA-DQA1Q5Y7H0 255 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 AP1ARQ63HQ0 302 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 SLC29A4Q7RTT9 530 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 APCDD1LQ8NCL9 501 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 NFAM1Q8NET5 270 aaPredicted RBP18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 B3GNT7Q8NFL0 401 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 THAP3Q8WTV1 239 aaPredicted RBP18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 MCHR1Q99705 422 aa18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 PTRH2Q9Y3E5 179 aaKnown RBP18.83■□□□□ 0.6
SNRPA1-205ENST00000558036 ASPMQ8IZT6 3477 aa18.82■□□□□ 0.6
SNRPA1-205ENST00000558036 FRG2CA6NGY1 282 aa18.82■□□□□ 0.6
SNRPA1-205ENST00000558036 SAGE2PA6NJ88 616 aa18.82■□□□□ 0.6
SNRPA1-205ENST00000558036 NPIPB9F8W1W9 429 aa18.82■□□□□ 0.6
SNRPA1-205ENST00000558036 H0YAE9 185 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms