RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ANGPTL1O95841 491 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 IGKV1D-16P01601 117 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 GSTA1P08263 222 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 FCGR2AP12318 317 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 IL11P20809 199 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 GABRA3P34903 492 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 MAP3K8P41279 467 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 SLC6A8P48029 635 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 PSMD4P55036 377 aaKnown RBP14.31□□□□□ -0.12
SCFD1-224ENST00000557713 SGCBQ16585 318 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.31□□□□□ -0.12
SCFD1-224ENST00000557713 GRAMD1BQ3KR37 738 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 GLE1Q53GS7 698 aaKnown RBP14.31□□□□□ -0.12
SCFD1-224ENST00000557713 TRIM46Q7Z4K8 759 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 PRIMA1Q86XR5 153 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 ACMSDQ8TDX5 336 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 HOXB13Q92826 284 aaPredicted RBP14.31□□□□□ -0.12
SCFD1-224ENST00000557713 GFM2Q969S9 779 aaKnown RBP14.31□□□□□ -0.12
SCFD1-224ENST00000557713 TBL1XR1Q9BZK7 514 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 GSX2Q9BZM3 304 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 KLHL4Q9C0H6 718 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 C3orf14Q9HBI5 128 aa14.31□□□□□ -0.12
SCFD1-224ENST00000557713 POLR3HQ9Y535 204 aaPredicted RBP14.31□□□□□ -0.12
SCFD1-224ENST00000557713 TRIM64A6NGJ6 449 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 TRIM64BA6NI03 449 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 TTC36A6NLP5 189 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 G3V2L1 256 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 GOLGA8RI6L899 631 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 SMAD7O15105 426 aaKnown RBP14.3□□□□□ -0.12
SCFD1-224ENST00000557713 NTSP30990 170 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 RFX3P48380 749 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 NOXRED1Q6NXP6 359 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 SH2D5Q6ZV89 423 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 OR6K3Q8NGY3 331 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 MZB1Q8WU39 189 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 ADGRG7Q96K78 797 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 EGLN2Q96KS0 407 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 EMCNQ9ULC0 261 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 CCL27Q9Y4X3 112 aa14.3□□□□□ -0.12
SCFD1-224ENST00000557713 EIF1AYO14602 144 aaKnown RBP14.29□□□□□ -0.12
SCFD1-224ENST00000557713 GMFGO60234 142 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 SS18L1O75177 396 aaPredicted RBP14.29□□□□□ -0.12
SCFD1-224ENST00000557713 RSL1D1O76021 490 aaKnown RBP14.29□□□□□ -0.12
SCFD1-224ENST00000557713 KCNH1O95259 989 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 PYGBP11216 843 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 PRPS2P11908 318 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 PAX1P15863 534 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 PPP3CBP16298 524 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 PTH2RP49190 550 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 KIAA0040Q15053 153 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 IMPG1Q17R60 797 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 EXOC3L2Q2M3D2 409 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 BEX5Q5H9J7 111 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 STAC2Q6ZMT1 411 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 PLEKHM3Q6ZWE6 761 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 IKBIPQ70UQ0 350 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 TRMT10CQ7L0Y3 403 aaKnown RBP14.29□□□□□ -0.12
SCFD1-224ENST00000557713 ZNF551Q7Z340 670 aaPredicted RBP14.29□□□□□ -0.12
SCFD1-224ENST00000557713 EXOC3L1Q86VI1 746 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 CCNYL1Q8N7R7 359 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 PIK3R3Q92569 461 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 CCDC126Q96EE4 140 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 GMPPAQ96IJ6 420 aaPredicted RBP14.29□□□□□ -0.12
SCFD1-224ENST00000557713 TNFRSF12AQ9NP84 129 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 STOML1Q9UBI4 398 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 DCDC2Q9UHG0 476 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 CLEC4AQ9UMR7 237 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 VDAC3Q9Y277 283 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 EMC9Q9Y3B6 208 aa14.29□□□□□ -0.12
SCFD1-224ENST00000557713 A0A087WZY1 265 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 KIAA1324LA8MWY0 1029 aaPredicted RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 ALG1L2C9J202 215 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 H3BQF6 201 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 RIPK2O43353 540 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 NKX2-2O95096 273 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 CNOT4O95628 575 aaKnown RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 ZNF17P17021 662 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 PSMA4P25789 261 aaKnown RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 EIF1AXP47813 144 aaKnown RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 NAA20P61599 178 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 CTU2Q2VPK5 515 aaKnown RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 ZYG11AQ6WRX3 759 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 WDR75Q8IWA0 830 aaKnown RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 GTPBP8Q8N3Z3 284 aaPredicted RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 OR4C3Q8NH37 302 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 OR10D3Q8NH80 312 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 FAM110BQ8TC76 370 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 GPR151Q8TDV0 419 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 METTL2AQ96IZ6 378 aaKnown RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 C16orf45Q96MC5 204 aaPredicted RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 NPAS1Q99742 590 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 PRRG4Q9BZD6 226 aa14.28□□□□□ -0.12
SCFD1-224ENST00000557713 RRAGDQ9NQL2 400 aaPredicted RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 PAQR5Q9NXK6 330 aaPredicted RBP14.28□□□□□ -0.12
SCFD1-224ENST00000557713 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.27□□□□□ -0.13
SCFD1-224ENST00000557713 ADAMDEC1O15204 470 aa14.27□□□□□ -0.13
SCFD1-224ENST00000557713 PLAUP00749 431 aa14.27□□□□□ -0.13
SCFD1-224ENST00000557713 NGFRP08138 427 aa14.27□□□□□ -0.13
SCFD1-224ENST00000557713 PRPH2P23942 346 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms