RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 A0A1B0GVI7 797 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 FABP7O15540 132 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 ADH1AP07327 375 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 ALPPL2P10696 532 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 SNRPD2P62316 118 aaKnown RBP15.23■□□□□ 0.03
SHMT2-232ENST00000557487 CSNK1G2P78368 415 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 SLC30A6Q6NXT4 461 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 BAIAP2L2Q6UXY1 529 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 ADAMTSL4Q6UY14 1074 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 PLEKHM3Q6ZWE6 761 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 C2orf73Q8N5S3 287 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-232ENST00000557487 BRIX1Q8TDN6 353 aaKnown RBP15.23■□□□□ 0.03
SHMT2-232ENST00000557487 ZNF431Q8TF32 576 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-232ENST00000557487 MYLIPQ8WY64 445 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 RADILQ96JH8 1075 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 SLC38A1Q9H2H9 487 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 LINC00597Q9H2U6 94 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 GHITMQ9H3K2 345 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 EMC3Q9P0I2 261 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 SLC23A1Q9UHI7 598 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 NUP50Q9UKX7 468 aa15.23■□□□□ 0.03
SHMT2-232ENST00000557487 C2orf92A0A1B0GVN3 265 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 A0A1W2PPV9 198 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 FEZF1A0PJY2 475 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 LRIT2A6NDA9 550 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 SLC22A5O76082 557 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 AGR2O95994 175 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 TPOP07202 933 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 CSNK2A2P19784 350 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-232ENST00000557487 TSFMP43897 325 aaKnown RBP15.22■□□□□ 0.03
SHMT2-232ENST00000557487 PRKAG1P54619 331 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 PITPNAQ00169 270 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 MAP4K2Q12851 820 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 MADCAM1Q13477 382 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 FAM205BPQ63HN1 556 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 METRNLQ641Q3 311 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 FAM109BQ6ICB4 259 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-232ENST00000557487 ERN2Q76MJ5 926 aaKnown RBP15.22■□□□□ 0.03
SHMT2-232ENST00000557487 CXXC5Q7LFL8 322 aaKnown RBP15.22■□□□□ 0.03
SHMT2-232ENST00000557487 LRRTM4Q86VH4 590 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 TEX19Q8NA77 164 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 TP53I13Q8NBR0 393 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-232ENST00000557487 OR8H1Q8NGG4 311 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 HGDQ93099 445 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 COX14Q96I36 57 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 OR7D2Q96RA2 312 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 MENTQ9BUN1 341 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 MTG2Q9H4K7 406 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 CACYBPQ9HB71 228 aaKnown RBP15.22■□□□□ 0.03
SHMT2-232ENST00000557487 CTPS2Q9NRF8 586 aa15.22■□□□□ 0.03
SHMT2-232ENST00000557487 ZFR2Q9UPR6 939 aaKnown RBP15.22■□□□□ 0.03
SHMT2-232ENST00000557487 DUXAA6NLW8 204 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 CPSF4LA6NMK7 179 aaKnown RBP15.21■□□□□ 0.03
SHMT2-232ENST00000557487 MPIP34949 423 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 CCR2P41597 374 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 RGS8P57771 180 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-232ENST00000557487 FCN2Q15485 313 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 ZIC1Q15915 447 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 NTRK2Q16620 822 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 MRM1Q6IN84 353 aaKnown RBP15.21■□□□□ 0.03
SHMT2-232ENST00000557487 RPL13AP3Q6NVV1 102 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 TEX261Q6UWH6 196 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 WASH2PQ6VEQ5 465 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 RTL10Q7L3V2 364 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 ABI3BPQ7Z7G0 1075 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 SRFBP1Q8NEF9 429 aaKnown RBP15.21■□□□□ 0.03
SHMT2-232ENST00000557487 OR8D1Q8WZ84 308 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 PHF21AQ96BD5 680 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 EIF3KQ9UBQ5 218 aaKnown RBP15.21■□□□□ 0.03
SHMT2-232ENST00000557487 KCNN3Q9UGI6 736 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 NPFFR2Q9Y5X5 522 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 U3KQ87 197 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 PLXND1Q9Y4D7 1925 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 MYOFQ9NZM1 2061 aa15.21■□□□□ 0.03
SHMT2-232ENST00000557487 TMEM265A0A087WTH1 108 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 MT-ND5P03915 603 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 FZD5Q13467 585 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 GALEQ14376 348 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 CEBPEQ15744 281 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 RAB30Q15771 203 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 CCDC85BQ15834 202 aaPredicted RBP15.21■□□□□ 0.02
SHMT2-232ENST00000557487 WDR45BQ5MNZ6 344 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 MEPCEQ7L2J0 689 aaKnown RBP15.21■□□□□ 0.02
SHMT2-232ENST00000557487 ADGRD2Q7Z7M1 963 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 SLC41A3Q96GZ6 507 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 C17orf62Q9BQA9 187 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 ALG8Q9BVK2 526 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 RAB11FIP5Q9BXF6 653 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 C1QTNF2Q9BXJ5 285 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 PBX4Q9BYU1 374 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 ACTR6Q9GZN1 396 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 HINT3Q9NQE9 182 aaKnown RBP15.21■□□□□ 0.02
SHMT2-232ENST00000557487 COL4A3Q01955 1670 aa15.21■□□□□ 0.02
SHMT2-232ENST00000557487 ZSCAN5BA6NJL1 495 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 GRXCR1A8MXD5 290 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 PLPP2O43688 288 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 SNAPC5O75971 98 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 RAF1P04049 648 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 CISD3P0C7P0 127 aa15.2■□□□□ 0.02
SHMT2-232ENST00000557487 ADRB3P13945 408 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms