RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 WDR45BQ5MNZ6 344 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 MEPCEQ7L2J0 689 aaKnown RBP15.21■□□□□ 0.02
SHMT2-231ENST00000557433 ADGRD2Q7Z7M1 963 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 SLAIN1Q8ND83 568 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 SLC41A3Q96GZ6 507 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 C17orf62Q9BQA9 187 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 ALG8Q9BVK2 526 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 RAB11FIP5Q9BXF6 653 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 C1QTNF2Q9BXJ5 285 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 ACTR6Q9GZN1 396 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 HINT3Q9NQE9 182 aaKnown RBP15.21■□□□□ 0.02
SHMT2-231ENST00000557433 COL4A3Q01955 1670 aa15.21■□□□□ 0.02
SHMT2-231ENST00000557433 ZSCAN5BA6NJL1 495 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 PLPP2O43688 288 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 SNAPC5O75971 98 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 RAF1P04049 648 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 CISD3P0C7P0 127 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 ADRB3P13945 408 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 UQCRC1P31930 480 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 CA8P35219 290 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 THBS2P35442 1172 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 PRDX1Q06830 199 aaKnown RBP15.2■□□□□ 0.02
SHMT2-231ENST00000557433 TEAD2Q15562 447 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 KLHL12Q53G59 568 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 PIP5KL1Q5T9C9 394 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 BCL2L15Q5TBC7 163 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 SFXN4Q6P4A7 337 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 C16orf62Q7Z3J2 963 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 CPOQ8IVL8 374 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 NRMQ8IXM6 262 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 DNAJC5GQ8N7S2 189 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 OR52L1Q8NGH7 329 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 ADAMTS14Q8WXS8 1223 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 ARRDC3Q96B67 414 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 FCRL4Q96PJ5 515 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 MCHR1Q99705 422 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 ACTRT3Q9BYD9 372 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 OR51J1Q9H342 316 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 ACSL5Q9ULC5 683 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 MGAT4AQ9UM21 535 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 SLC27A6Q9Y2P4 619 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 GPSM3Q9Y4H4 160 aa15.2■□□□□ 0.02
SHMT2-231ENST00000557433 EDDM13A0A1B0GTR0 161 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 ABHD14A-ACY1A0A1B0GW23 586 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 ANKRD61A6NGH8 418 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 SMLR1H3BR10 107 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 CCL16O15467 120 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 TPD52L2O43399 206 aaKnown RBP15.19■□□□□ 0.02
SHMT2-231ENST00000557433 ITGA10O75578 1167 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 ERAL1O75616 437 aaKnown RBP15.19■□□□□ 0.02
SHMT2-231ENST00000557433 SOX30O94993 753 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 CH25HO95992 272 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 PAHP00439 452 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 EIF4EP06730 217 aaKnown RBP15.19■□□□□ 0.02
SHMT2-231ENST00000557433 HIST1H1TP22492 207 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-231ENST00000557433 BTCP35070 178 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 GCGRP47871 477 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 EIPR1Q53HC9 387 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 C9orf64Q5T6V5 341 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 SLC48A1Q6P1K1 146 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 NIPAL3Q6P499 406 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 ZNF793Q6ZN11 406 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 GDF7Q7Z4P5 450 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 FGD2Q7Z6J4 655 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 VRK2Q86Y07 508 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 RNF113BQ8IZP6 322 aaKnown RBP15.19■□□□□ 0.02
SHMT2-231ENST00000557433 SIRT6Q8N6T7 355 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 SAMD12Q8N8I0 201 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 AMER3Q8N944 861 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 NUP43Q8NFH3 380 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 OR5W2Q8NH69 310 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 GANCQ8TET4 914 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 YIPF4Q9BSR8 244 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 NDC1Q9BTX1 674 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 UBQLN3Q9H347 655 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 ZFP64Q9NPA5 681 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 GLTPQ9NZD2 209 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 SLC22A31A6NKX4 558 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 GPR89AB7ZAQ6 455 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 UBL3O95164 117 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 IFNA7P01567 189 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 SERPIND1P05546 499 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 SLC35G4P0C7Q5 338 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 GPR89BP0CG08 455 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 TRHRP34981 398 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-231ENST00000557433 AHRP35869 848 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 MMP15P51511 669 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 HSF2Q03933 536 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 TLE2Q04725 743 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 RGS1Q08116 209 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 LRRC32Q14392 662 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 HEPHL1Q6MZM0 1159 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 ASB18Q6ZVZ8 466 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 OLIG3Q7RTU3 272 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 NR2C2APQ86WQ0 139 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 NKAIN4Q8IVV8 208 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 CMIPQ8IY22 773 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 SPERTQ8NA61 448 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 ZNF680Q8NEM1 530 aa15.19■□□□□ 0.02
SHMT2-231ENST00000557433 BBS1Q8NFJ9 593 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms