RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 RNF144AP50876 292 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-210ENST00000557431 EEFSECP57772 596 aaKnown RBP12.61□□□□□ -0.39
SLIRP-210ENST00000557431 MRPS22P82650 360 aaKnown RBP12.61□□□□□ -0.39
SLIRP-210ENST00000557431 ZNF844Q08AG5 666 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 HEPACAMQ14CZ8 416 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 DECR1Q16698 335 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 SPIN4Q56A73 249 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 SPDYAQ5MJ70 313 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 ANKRD26P1Q6NSI1 321 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 ZNF619Q8N2I2 560 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 OR10D3Q8NH80 312 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 AKAP1Q92667 903 aaKnown RBP eCLIP12.61□□□□□ -0.39
SLIRP-210ENST00000557431 ERP27Q96DN0 273 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 DTNBP1Q96EV8 351 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 OTUB1Q96FW1 271 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-210ENST00000557431 ZNF382Q96SR6 550 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 FUT8Q9BYC5 575 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 ACTR6Q9GZN1 396 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 PTGES2Q9H7Z7 377 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 DDX18Q9NVP1 670 aaKnown RBP12.61□□□□□ -0.39
SLIRP-210ENST00000557431 ABCG2Q9UNQ0 655 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 C19orf53Q9UNZ5 99 aaPredicted RBP12.61□□□□□ -0.39
SLIRP-210ENST00000557431 LAMP3Q9UQV4 416 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 FBN3Q75N90 2809 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 GOLGA8RI6L899 631 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 TNFSF11O14788 317 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 URI1O94763 535 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-210ENST00000557431 IL33O95760 270 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 PLGP00747 810 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-210ENST00000557431 COL6A2P12110 1019 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 DDCP20711 480 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 GCAP28676 217 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 SHC1P29353 583 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 GABRA3P34903 492 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 CDKN1AP38936 164 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 PCYT1AP49585 367 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 CTBP2P56545 445 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 CKAP4Q07065 602 aaKnown RBP12.6□□□□□ -0.39
SLIRP-210ENST00000557431 VEZF1Q14119 521 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 GANABQ14697 944 aaKnown RBP12.6□□□□□ -0.39
SLIRP-210ENST00000557431 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.6□□□□□ -0.39
SLIRP-210ENST00000557431 MFSD12Q6NUT3 480 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 ZNF551Q7Z340 670 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-210ENST00000557431 ZAR1Q86SH2 424 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 OR6K3Q8NGY3 331 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 ROBO4Q8WZ75 1007 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 GFM2Q969S9 779 aaKnown RBP12.6□□□□□ -0.39
SLIRP-210ENST00000557431 C11orf24Q96F05 449 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-210ENST00000557431 SH3YL1Q96HL8 342 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-210ENST00000557431 TBL1XR1Q9BZK7 514 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 Q9N2J8 555 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 MIEF1Q9NQG6 463 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 SDHAF3Q9NRP4 125 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 FAM120CQ9NX05 1096 aaKnown RBP12.6□□□□□ -0.39
SLIRP-210ENST00000557431 EMC9Q9Y3B6 208 aa12.6□□□□□ -0.39
SLIRP-210ENST00000557431 PLCE1Q9P212 2302 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 A0A087WV62 115 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 UBFD1O14562 309 aaKnown RBP12.59□□□□□ -0.39
SLIRP-210ENST00000557431 HS3ST1O14792 307 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 NDUFS7O75251 213 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 PSMG1O95456 288 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 IL11P20809 199 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 ZNF763Q0D2J5 394 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 HSPB3Q12988 150 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 WHAMMP3Q1A5X7 153 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 TMEM44Q2T9K0 475 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 CYP27C1Q4G0S4 372 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 FAM71E1Q6IPT2 247 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 SAMD14Q8IZD0 417 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-210ENST00000557431 LILRB1Q8NHL6 650 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-210ENST00000557431 IFT81Q8WYA0 676 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 ELP4Q96EB1 424 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 ADGRG7Q96K78 797 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 EGLN2Q96KS0 407 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 RNF145Q96MT1 663 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 AMDHD1Q96NU7 426 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 LMF2Q9BU23 707 aaKnown RBP12.59□□□□□ -0.39
SLIRP-210ENST00000557431 SHCBP1LQ9BZQ2 653 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 GSTO2Q9H4Y5 243 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 TNFRSF12AQ9NP84 129 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 MID1IP1Q9NPA3 183 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 PLSCR4Q9NRQ2 329 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 ZNF701Q9NV72 531 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-210ENST00000557431 FBXO34Q9NWN3 711 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 PTGDR2Q9Y5Y4 395 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 AP4B1Q9Y6B7 739 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 COL6A5A8TX70 2615 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 MALRD1Q5VYJ5 2156 aa12.59□□□□□ -0.39
SLIRP-210ENST00000557431 FBN1P35555 2871 aaKnown RBP12.58□□□□□ -0.4
SLIRP-210ENST00000557431 A0A0J9YW62 118 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 CLOCKO15516 846 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 SS18L1O75177 396 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-210ENST00000557431 CRLF1O75462 422 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 OXSR1O95747 527 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-210ENST00000557431 SNRPAP09012 282 aaKnown RBP12.58□□□□□ -0.4
SLIRP-210ENST00000557431 TAC1P20366 129 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 EFNA1P20827 205 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-210ENST00000557431 ECHS1P30084 290 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 NTSP30990 170 aa12.58□□□□□ -0.4
SLIRP-210ENST00000557431 PRKAG1P54619 331 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms